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Summary[edit source | edit]

  • pan ID?: SAUPAN004325000
  • symbol?: pfkA
  • description?: 6-phosphofructokinase
  • strand?: -
  • coordinates?: 4569092..4570015
  • synteny block?: BlockID0033490
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1746 (pfkA)
    N315:
    SA1521 (pfkA)
    NCTC8325:
    Newman:
    NWMN_1593 (pfk)
    USA300_FPR3757:
    04-02981:
    SA2981_1657 (pfk)
    08BA02176:
    C248_1740 (pfkA)
    11819-97:
    MS7_1705 (pfkA)
    71193:
    ST398NM01_1752
    ECT-R 2:
    ECTR2_1538 (pfkA)
    ED133:
    SAOV_1686 (pfkA)
    ED98:
    SAAV_1688 (pfkA)
    HO 5096 0412:
    SAEMRSA15_16080 (pfkA)
    JH1:
    SaurJH1_1789
    JH9:
    SaurJH9_1755
    JKD6008:
    SAA6008_01667 (pfkA)
    JKD6159:
    SAA6159_01622 (pfkA)
    LGA251:
    SARLGA251_15900 (pfkA)
    M013:
    M013TW_1711
    MRSA252:
    SAR1777 (pfkA)
    MSHR1132:
    SAMSHR1132_15490
    MSSA476:
    SAS1626 (pfkA)
    Mu3:
    SAHV_1684 (pfk)
    Mu50:
    SAV1698 (pfkA)
    MW2:
    MW1642 (pfkA)
    RF122:
    SAB1557c (pfkA)
    ST398:
    SAPIG1752 (pfkA)
    T0131:
    SAT0131_01802
    TCH60:
    HMPREF0772_11453 (pfkA)
    TW20:
    SATW20_16900 (pfkA)
    USA300_TCH1516:
    USA300HOU_1685 (pfkA)
    VC40:
    SAVC_07705

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKKIAVLTSGGDSPGMNAAVRAVVRTAIYNEIEVYGVYHGYQGLLNDDIHKLELGSVGDT
    N315            ---------------MNAAVRAVVRTAIYNEIEVYGVYHGYQGLLNDDIHKLELGSVGDT
    NCTC8325        ---------------MNAAVRAVVRTAIYNEIEVYGVYHGYQGLLNDDIHKLELGSVGDT
    Newman          MKKIAVLTSGGDSPGMNAAVRAVVRTAIYNEIEVYGVYHGYQGLLNDDIHKLELGSVGDT
    USA300_FPR3757  ---------------MNAAVRAVVRTAIYNEIEVYGVYHGYQGLLNDDIHKLELGSVGDT
                                   *********************************************

    COL             IQRGGTFLYSARCPEFKEQEVRKVAIENLRKRGIEGLVVIGGDGSYRGAQRISEECKEIQ
    N315            IQRGGTFLYSARCPEFKEQEVRKVAIENLRKRGIEGLVVIGGDGSYRGAQRISEECKEIQ
    NCTC8325        IQRGGTFLYSARCPEFKEQEVRKVAIENLRKRGIEGLVVIGGDGSYRGAQRISEECKEIQ
    Newman          IQRGGTFLYSARCPEFKEQEVRKVAIENLRKRGIEGLVVIGGDGSYRGAQRISEECKEIQ
    USA300_FPR3757  IQRGGTFLYSARCPEFKEQEVRKVAIENLRKRGIEGLVVIGGDGSYRGAQRISEECKEIQ
                    ************************************************************

    COL             TIGIPGTIDNDINGTDFTIGFDTALNTIIGLVDKIRDTASSHARTFIIEAMGRDCGDLAL
    N315            TIGIPGTIDNDINGTDFTIGFDTALNTIIGLVDKIRDTASSHARTFIIEAMGRDCGDLAL
    NCTC8325        TIGIPGTIDNDINGTDFTIGFDTALNTIIGLVDKIRDTASSHARTFIIEAMGRDCGDLAL
    Newman          TIGIPGTIDNDINGTDFTIGFDTALNTIIGLVDKIRDTASSHARTFIIEAMGRDCGDLAL
    USA300_FPR3757  TIGIPGTIDNDINGTDFTIGFDTALNTIIGLVDKIRDTASSHARTFIIEAMGRDCGDLAL
                    ************************************************************

    COL             WAGLSVGAETIVVPEVKTDIKEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYI
    N315            WAGLSVGAETIVVPEVKTDIKEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYI
    NCTC8325        WAGLSVGAETIVVPEVKTDIKEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYI
    Newman          WAGLSVGAETIVVPEVKTDIKEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYI
    USA300_FPR3757  WAGLSVGAETIVVPEVKTDIKEIADKIEQGIKRGKKHSIVLVAEGCMTAQDCQKELSQYI
                    ************************************************************

    COL             NVDNRVSVLGHVQRGGSPTGADRVLASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDE
    N315            NVDNRVSVLGHVQRGGSPTGADRVLASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDE
    NCTC8325        NVDNRVSVLGHVQRGGSPTGADRVLASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDE
    Newman          NVDNRVSVLGHVQRGGSPTGADRVLASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDE
    USA300_FPR3757  NVDNRVSVLGHVQRGGSPTGADRVLASRLGGYAVDLLMQGETAKGVGIKNNKIVATSFDE
                    ************************************************************

    COL             IFDGKDHKFDYSLYELANKLSI
    N315            IFDGKDHKFDYSLYELANKLSI
    NCTC8325        IFDGKDHKFDYSLYELANKLSI
    Newman          IFDGKDHKFDYSLYELANKLSI
    USA300_FPR3757  IFDGKDHKFDYSLYELANKLSI
                    **********************