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Summary[edit source | edit]

  • pan ID?: SAUPAN004361000
  • symbol?: ald2
  • description?: alanine dehydrogenase

      descriptions from strain specific annotations:

    • alanine dehydrogenase
    • alanine dehydrogenase 1
    • Alanine dehydrogenase 2
  • strand?: -
  • coordinates?: 4600805..4601923
  • synteny block?: BlockID0033660
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1758 (ald2)
    N315:
    SA1531 (ald)
    NCTC8325:
    Newman:
    NWMN_1603 (ald)
    USA300_FPR3757:
    04-02981:
    SA2981_1667 (ald)
    08BA02176:
    C248_1750 (ald1)
    11819-97:
    MS7_1715
    71193:
    ST398NM01_1762
    ECT-R 2:
    ECTR2_1549 (ald)
    ED133:
    SAOV_1696 (ald_1)
    ED98:
    SAAV_1719 (ald2)
    HO 5096 0412:
    SAEMRSA15_16180 (ald1)
    JH1:
    SaurJH1_1800
    JH9:
    SaurJH9_1765
    JKD6008:
    SAA6008_01677 (ald)
    JKD6159:
    SAA6159_01633 (ald)
    LGA251:
    SARLGA251_16000 (ald1)
    M013:
    M013TW_1722
    MRSA252:
    SAR1787 (ald1)
    MSHR1132:
    SAMSHR1132_15590
    MSSA476:
    SAS1636
    Mu3:
    SAHV_1695 (ald)
    Mu50:
    SAV1709 (ald)
    MW2:
    MW1652 (ald)
    RF122:
    SAB1568c (ald)
    ST398:
    SAPIG1762 (ald)
    T0131:
    SAT0131_01812
    TCH60:
    HMPREF0772_11443 (ald)
    TW20:
    SATW20_17000 (ald1)
    USA300_TCH1516:
    USA300HOU_1696 (ald)
    VC40:
    SAVC_07755

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSFFEDVDYKEAGAEIVAE
    N315            MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSFFEDVDYKEAGAEIVAE
    NCTC8325        MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSFFEDVDYKEAGAEIVAE
    Newman          MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSFFEDVDYKEAGAEIVAE
    USA300_FPR3757  MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSFFEDVDYKEAGAEIVAE
                    ************************************************************

    COL             QAKVWDVDMVIKVKEPLESEYPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQ
    N315            QAKVWDVDMVIKVKEPLESEYPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQ
    NCTC8325        QAKVWDVDMVIKVKEPLESEYPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQ
    Newman          QAKVWDVDMVIKVKEPLESEYPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQ
    USA300_FPR3757  QAKVWDVDMVIKVKEPLESEYPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQ
                    ************************************************************

    COL             LPDRSLPLLSPMSEVAGRMSAQVGAEFLQKLNGGMGILLGGVPGVPKGKVTIIGGGQAGT
    N315            LPDRSSPLLSPMSEVAGRMSAQVGAEFLQKLNGGMGILLGGVPGVPKGKVTIIGGGQAGT
    NCTC8325        LPDRSLPLLSPMSEVAGRMSAQVGAEFLQKLNGGMGILLGGVPGVPKGKVTIIGGGQAGT
    Newman          LPDRSLPLLSPMSEVAGRMSAQVGAEFLQKLNGGMGILLGGVPGVPKGKVTIIGGGQAGT
    USA300_FPR3757  LPDRSLPLLSPMSEVAGRMSAQVGAEFLQKLNGGMGILLGGVPGVPKGKVTIIGGGQAGT
                    ***** ******************************************************

    COL             NAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTIMSNPLNIELYVKQSDLVIGAVLI
    N315            NAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTIMSNPLNIELYVKQSDLVIGAVLI
    NCTC8325        NAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTIMSNPLNIELYVKQSDLVIGAVLI
    Newman          NAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTIMSNPLNIELYVKQSDLVIGAVLI
    USA300_FPR3757  NAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTIMSNPLNIELYVKQSDLVIGAVLI
                    ************************************************************

    COL             PGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFETTDKITTHDDPTYIKHGVVHYAVAN
    N315            PGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFETTDKITTHDDPTYIKHGVVHYAVAN
    NCTC8325        PGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFETTDKITTHDDPTYIKHGVVHYAVAN
    Newman          PGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFETTDKITTHDDPTYIKHGVVHYAVAN
    USA300_FPR3757  PGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFETTDKITTHDDPTYIKHGVVHYAVAN
                    ************************************************************

    COL             MPGAVPRTSTLALNNATLPYALMLANKGYREAFKSNQPLSLGLNTYKGHVTNKGVAEAFE
    N315            MPGAVPRTSTLALNNATLPYALMLANKGYREAFKSNQPLSLGLNTYKGHVTNKGVAEAFE
    NCTC8325        MPGAVPRTSTLALNNATLPYALMLANKGYREAFKSNQPLSLGLNTYKGHVTNKGVAEAFE
    Newman          MPGAVPRTSTLALNNATLPYALMLANKGYREAFKSNQPLSLGLNTYKGHVTNKGVAEAFE
    USA300_FPR3757  MPGAVPRTSTLALNNATLPYALMLANKGYREAFKSNQPLSLGLNTYKGHVTNKGVAEAFE
                    ************************************************************

    COL             MEYKSVEEALQL
    N315            MEYKSVEEALQL
    NCTC8325        MEYKSVEEALQL
    Newman          MEYKSVEEALQL
    USA300_FPR3757  MEYKSVEEALQL
                    ************