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Summary[edit source | edit]

  • pan ID?: SAUPAN004954000
  • symbol?: ppaC
  • description?: manganese-dependent inorganic pyrophosphatase

      descriptions from strain specific annotations:

    • manganese-dependent inorganic pyrophosphatase
    • putative manganese-dependent inorganic pyrophosphatase
    • inorganic diphosphatase PpaC
    • manganese-dependent inorganic pyrophosphatase (Pyrophosphate phospho-hydrolase) (PPase)
  • strand?: +
  • coordinates?: 5142336..5143271
  • synteny block?: BlockID0038580
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL1982 (ppaC)
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1876
    08BA02176:
    C248_1996 (ppaC)
    11819-97:
    MS7_1954 (ppaC)
    71193:
    ST398NM01_2014
    ECT-R 2:
    ECTR2_1791
    ED133:
    SAOV_2022 (ppaC)
    ED98:
    SAAV_1986 (ppaC)
    HO 5096 0412:
    SAEMRSA15_18290 (ppaC)
    JH1:
    SaurJH1_2009
    JH9:
    SaurJH9_1975
    JKD6008:
    SAA6008_01940 (ppaC)
    JKD6159:
    SAA6159_01851 (ppaC)
    LGA251:
    SARLGA251_18040 (ppaC)
    M013:
    M013TW_1956
    MRSA252:
    SAR2012 (ppaC)
    MSHR1132:
    SAMSHR1132_17640
    MSSA476:
    SAS1843
    Mu3:
    SAHV_1904
    Mu50:
    SAV1919
    MW2:
    MW1860
    RF122:
    SAB1856 (ppaC)
    ST398:
    SAPIG2014
    T0131:
    SAT0131_02048
    TCH60:
    HMPREF0772_11222 (ppaC)
    TW20:
    SATW20_19140 (ppaC)
    USA300_TCH1516:
    USA300HOU_1921 (ppaC)
    VC40:
    SAVC_08860

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             --MAKTYIFGHKNPDTDAISSAIIMAEFEQLRGNSGAKAYRLGDVSAETQFALDTFNVPA
    N315            --MAKTYIFGHKNPDTDAISSAIIMAEFEQLRGNSGAKAYRLGDVSAETQFALDTFNVPA
    NCTC8325        --MAKTYIFGHKNPDTDAISSAIIMAEFEQLRGNSGAKAYRLGDVSAETQFALDTFNVPA
    Newman          MTMAKTYIFGHKNPDTDAISSAIIMAEFEQLRGNSGAKAYRLGDVSAETQFALDTFNVPA
    USA300_FPR3757  --MAKTYIFGHKNPDTDAISSAIIMAEFEQLRGNSGAKAYRLGDVSAETQFALDTFNVPA
                      **********************************************************

    COL             PELLTDDLDGQDVILVDHNEFQQSSDTIASATIKHVIDHHRIANFETAGPLCYRAEPVGC
    N315            PELLTDDLDGQDVILVDHNEFQQSSDTIASATIKHVIDHHRIANFETAGPLCYRAEPVGC
    NCTC8325        PELLTDDLDGQDVILVDHNEFQQSSDTIASATIKHVIDHHRIANFETAGPLCYRAEPVGC
    Newman          PELLTDDLDGQDVILVDHNEFQQSSDTIASATIKHVIDHHRIANFETAGPLCYRAEPVGC
    USA300_FPR3757  PELLTDDLDGQDVILVDHNEFQQSSDTIASATIKHVIDHHRIANFETAGPLCYRAEPVGC
                    ************************************************************

    COL             TATILYKMFRERGFEIKPEIAGLMLSAIISDSLLFKSPTCTQQDVKAAEELKDIAKVDIQ
    N315            TATILYKMFRERGFEIKPEIAGLMLSAIISDSLLFKSPTCTQQDVKAAEELKDIAKVDIQ
    NCTC8325        TATILYKMFRERGFEIKPEIAGLMLSAIISDSLLFKSPTCTQQDVKAAEELKDIAKVDIQ
    Newman          TATILYKMFRERGFEIKPEIAGLMLSAIISDSLLFKSPTCTQQDVKAAEELKDIAKVDIQ
    USA300_FPR3757  TATILYKMFRERGFEIKPEIAGLMLSAIISDSLLFKSPTCTQQDVKAAEELKDIAKVDIQ
                    ************************************************************

    COL             KYGLDMLKAGASTTDKSVEFLLNMDAKSFTMGDYVTRIAQVNAVDLDEVLNRKEDLEKEM
    N315            KYGLDMLKAGASTTDKSVEFLLNMDAKSFTMGDYVTRIAQVNAVDLDEVLNRKEDLEKEM
    NCTC8325        KYGLDMLKAGASTTDKSVEFLLNMDAKSFTMGDYVTRIAQVNAVDLDEVLNRKEDLEKEM
    Newman          KYGLDMLKAGASTTDKSVEFLLNMDAKSFTMGDYVTRIAQVNAVDLDEVLNRKEDLEKEM
    USA300_FPR3757  KYGLDMLKAGASTTDKSVEFLLNMDAKSFTMGDYVTRIAQVNAVDLDEVLNRKEDLEKEM
                    ************************************************************

    COL             LAVSAQEKYDLFVLVVTDIINSDSKILVVGAEKDKVGEAFNVQLEDDMAFLSGVVSRKKQ
    N315            LAVSAQEKYDLFVLVVTDIINSDSKILVVGAEKDKVGEAFNVQLEDDMAFLSGVVSRKKQ
    NCTC8325        LAVSAQEKYDLFVLVVTDIINSDSKILVVGAEKDKVGEAFNVQLEDDMAFLSGVVSRKKQ
    Newman          LAVSAQEKYDLFVLVVTDIINSDSKILVVGAEKDKVGEAFNVQLEDDMAFLSGVVSRKKQ
    USA300_FPR3757  LAVSAQEKYDLFVLVVTDIINSDSKILVVGAEKDKVGEAFNVQLEDDMAFLSGVVSRKKQ
                    ************************************************************

    COL             IVPQITEALTK
    N315            IVPQITEALTK
    NCTC8325        IVPQITEALTK
    Newman          IVPQITEALTK
    USA300_FPR3757  IVPQITEALTK
                    ***********