PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005048000
• symbol^?: —
• synonym:
• description^?: phage tail tape measure protein

  descriptions from strain specific annotations:

  • phage tail tape measure protein
  • bacteriophage tail tape measure protein, TP901 family
  • phi77 ORF001-like protein, phage tail tape measure protein
  • phage tail length tape measure protein
  • bacteriophage tail length tape measure protein
  • phage tail tape measure protein, TP901 family, core region
  • Phi PVL hypothetical protein
  • phi PVL ORF 15 and 16 homologue
  • phi PVL ORF 15 and 16-like protein
  • pseudogene
  • TP901 family phage tail tape measure protein
• strand^?: -
• coordinates^?: 5210908..5218102
• synteny block^?: BlockID0039260
• occurrence^?: in 58% of 33 strains

⊟Orthologs

COL:
—
N315:
SA1766
NCTC8325:
—
Newman:
NWMN_1888
USA300_FPR3757:
SAUSA300_1930
04-02981:
SA2981_1916
08BA02176:
—
11819-97:
—
6850:
RSAU_000608
71193:
ST398NM01_2919
ECT-R 2:
ECTR2_1827
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_18700
JH1:
SaurJH1_2046
JH9:
SaurJH9_2010
JKD6008:
SAA6008_02009
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR2050
MSHR1132:
SAMSHR1132_17950
MSSA476:
—
Mu3:
SAHV_1941
Mu50:
SAV1955
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_02088 (cspC)
TCH60:
HMPREF0772_11186
TW20:
SATW20_19470
USA300_TCH1516:
USA300HOU_1959
VC40:
—

⊟Genome Viewer

N315
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  N315            MGERIKGLSIGLDLDAANLNRSFAEIKRNFKTLNSDLKLTGNNFKYTEKSTHSYKQRIKE
  Newman          MGERIKGLSIGLDLDAANLNRSFAEIKRNFKTLNSDLKLTGNNFKYTEKSTHSYKQRIKE
  USA300_FPR3757  MGERIKGLSIGLDLDAANLNRSFAEIKRNFKTLNSDLKLTGNNFKYTEKSTDSYKQRIKE
                  ***************************************************.********
  
  N315            LDGTITGYKKNVDDLAKQYGKVSQEQGENSAEAQKLRQEYNKQANELNFLEKELEKTTTE
  Newman          LDGTITGYKKNVDDLAKQYGKVSQEQGENSAEAQKLRQEYNKQANELNFLEKELEKTTTE
  USA300_FPR3757  LDGTITGYKKNVDDLAKQYDKVSQEQGENSAGAQKLRQEYNKQANELNYLERELQKTSAE
                  *******************.*********** ****************:**:**:**::*
  
  N315            FEEFKKAQVEAQRMAESGWGKTSKVFESMGPKLTKMGDGLKSIGKGLMIGVTAPVLGIAA
  Newman          FEEFKKAQVEAQRMAESGWGKTSKVFESMGPKLTKMGDGLKSIGKGLMIGVTAPVLGIAA
  USA300_FPR3757  FEEFKKAQVEAQRMAESGWGKTSKVFESMGPKLTKMGDGLKSIGKGMMIGVTAPVLGIAA
                  **********************************************:*************
  
  N315            ASGKAFAEVDKGLDTVTQATGATGGELKKLQNSFKDVYGNFPEDAETVGGVLGEVNTRLG
  Newman          ASGKAFAEVDKGLDTVTQATGATGGELKKLQNSFKDVYGNFPADAETVGGVLGEVNTRLG
  USA300_FPR3757  ASGKAFAEVDKGLDTVTQATGATGSELKKLQNSFKDVYGNFPADAETVGGVLGEVNTRLG
                  ************************.***************** *****************
  
  N315            FTGKELESATESFLKFSHITGSDGVQAVQLITRAMGDAGIEADEYQSVLDMVAKAAQASG
  Newman          FTGKELESATESFLKFSHITGSDGVQAVQLITRAMGDAGIEADEYQSVLDMVAKAAQASG
  USA300_FPR3757  FTGKELENATESFLKFSHITGSDGVQAVQLITRAMGDAGIEASEYQSVLDMVAKAAQASG
                  *******.**********************************.*****************
  
  N315            ISVDTLADSITKYGAPMRAMGFEMKESIALFSQWEKSGVNTEIAFSGLKKAISNWGKAGK
  Newman          ISVDTLADSITKYGAPMRAMGFEMKESIALFSQWEKSGVNTEIAFSGLKKAISNWGKAGK
  USA300_FPR3757  ISVDTLADSITKYGAPMRAMGFEMKESIALFSQWEKSGVNTEIAFSGLKKAISNWGKAGK
                  ************************************************************
  
  N315            DPREEFKKTLAEIERTPDIASATSLAIEAFGAKAGPDLADAIKGGRFSYQEFLKTIEDSQ
  Newman          DPREEFKKTLAEIERTPDIASATSLAIEAFGAKAGPDLADAIKGGRFSYQEFLKTIEDSQ
  USA300_FPR3757  NPREEFKKTLAEIEKTPDIASATILAIEAFGAKAGPDLADAIKGGRFSYQEFLKTIEDSQ
                  :*************:******** ************************************
  
  N315            GTVNQTFKDSESGSERFKVAMNKLKLVGADVWASIESAFAPVMEELIKKLSVAVDWFSSL
  Newman          GTVNQTFKDSESGSERFKVAMNKLKLVGADVWASIESAFAPVMEELIKKLSVAVDWFSSL
  USA300_FPR3757  GTVNQTFKDSESGSERFKVAMNKLKLVGADVWASIESAFAPVMEELIKKLSVAVDWFSNL
                  **********************************************************.*
  
  N315            SDGSKRSIVIFGGIAAAIGPVVFGLGAFISTVGNAVTVLAPLLASIAKAGGLISFLSTKV
  Newman          SDGSKRSIVIFGGIAAAIGPVVFGLGAFISTIGNAVTVLAPLLASIVKAGGLISFLSTKV
  USA300_FPR3757  SDGSKRSIVIFGGIAAAIGPVVFGLGAFISTIGNAVTVLAPLLAGIAKADGLISFLSTKV
                  *******************************:************.*.**.**********
  
  N315            PILGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSETFRNFVNGAIESVKQTFSNFIQFI
  Newman          PILGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSETFRNFVNGAINSVKQTFSNFIQFI
  USA300_FPR3757  PILGTVFTALTGPIGIVLGVLAGLAVAFTIAYKKSETFRNFVNDAIESVKQTFSNFIQFI
                  *******************************************.**:*************
  
  N315            QPFIDSVKNIFKQAISAIVDFAKDIWSQINGFFNENGISIVQALQNICNFIKAIFEFILN
  Newman          QPFIDSVKNVFKQAVSAIVDFAKDIWSQINGFFNENGISIVQALQNICNFIKAIFEFILN
  USA300_FPR3757  QPFIDSVKNVFKQAVSAIVDFAKDIWSQINGFFNENGISIVQALQNICNFIKVIFEFILN
                  *********:****:*************************************.*******
  
  N315            FVIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGVIQGAINIILGIIKVFSSLFTGNWRG
  Newman          FVIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGVIQGALNIILGFIKFFSSLFTGNWRG
  USA300_FPR3757  FVIKPIMFAIWQVMQFIWPAVKALIVSTWENIKGVIQGTLNIILGLIKFFSSLFTGDWRG
                  **************************************::*****:**.*******:***
  
  N315            VWDGIVMILKGTVQLIWNLIQLWFVGKILGVVRYFGGLLKGLITIIWVAIIGVFKKSLSA
  Newman          VWDGIVMILKGTVQLIWNLIQLWFVGKILGVVRYFGGLLKGLISGIWGVIKGIFTKSLSA
  USA300_FPR3757  VWDAIIMILKGVVQLIWNLIQLWFVGKILGVVRYFGGLLKGLITGIWDVIKSIFSKSLSA
                  ***.*:*****.*******************************: ** .* .:*.*****
  
  N315            IWNATKSIFGFLFNSVKSIFTNMKNWLSSTWNNIKSNTVGKAHSLFTGVRSKFTSLWNAT
  Newman          IWNATKSIFGFLYNSVKSIFTNMKNWLSSTWNNIKSNTVGKAHSLFTGVRSKFTSLWNAT
  USA300_FPR3757  IWNATKSIFGFLFNSVKSIFTNMKNWLSNTWSSIRTNTIGKAQSLFSGVKSKFTSLWNAT
                  ************:***************.**..*::**:***:***:**:**********
  
  N315            KDIFIKLRNWMSNIWNSIKDNTVGIAGRLWDRVRNIFGSMRDGLKSIIGKIKDHIGGMVD
  Newman          KDIFTKLRNWMSNIWNSIKDNTVGIAGRLWDRVRNIFGSMRDGLKSIISKIKDHIGGMVD
  USA300_FPR3757  KDIFSNLRNWMANIWNSIKDNTVGIASRLWSKVRGIFTNMRDGLQSIISKIKSHIGGMVD
                  **** :*****:**************.***.:**.** .*****:***.***.*******
  
  N315            AVKRGLNKLIEGLNWVGGKLGMDKIPKLHTGTEHTHTTTRLVKNGKIARDTFATVGDKGR
  Newman          AVKRGLNKLIEGLNWVGGKLGMDKIPKLHTGTEHTHTTTRLVKNGKIARDTFATVGDKGR
  USA300_FPR3757  AIKKGLNKLIEGLNWVGGKLGMDKIPKLHTGTEHTHTTTRLVKNGKIARDTFATVGDKGR
                  *:*:********************************************************
  
  N315            GNGPNGFRNEMIEFPNGKRVLTPNTDTTAYLPKGSKVYNGAQTYSMLNGTLPRFSIGTMW
  Newman          GNGPNGFRNEMIEFPNGKRVITPNTDTTAYLPKGSKVYNGAQTYSMLNGTLPRFSLGTMW
  USA300_FPR3757  GNGPNGFRNEIIEFPNGKRVITPNTDTTAYLPKGSKVYNGTQTYSMLNGTLPRFSLGTMW
                  **********:*********:*******************:**************:****
  
  N315            KDIKSGASSAFNWTKDQIGKGTKWLGDKVGDVLDFIENPGKLLNYILEAFGIDFNSLTKG
  Newman          KDIKSGASSAFNWTKDKIGKGTKWLGDKVGDVLDFMENPGKLLNYILEAFGIDFNSLTKG
  USA300_FPR3757  KDIKSGASSAFNWTKDQIGKGTKWLGDKVGDVLDFMENPGKLLNYILEAFGIDFNSLTKG
                  ****************:******************:************************
  
  N315            MGIAGDITKAAWSKIKKSATDWIKENLEAMGGGDLVGGILDPDKINYHYGRTAAYTAATG
  Newman          MGIAGDITKAAWSKIKKSATDWIKENLEAMGGGDLVGGILDPDKINYHYGRTAAYTAATG
  USA300_FPR3757  MGIAGDITKAAWSKIKKSATDWIKENLEAMGGGDLVGGILDPDKINYHYGRTAAYTAATG
                  ************************************************************
  
  N315            RPFHEGVDFPFVYQEVRTPMGGRLTRMPFMSGGYGNYVKITSGVIDMLFAHLKNFSKSPP
  Newman          RPFHEGVDFPFVYQEVRTPMGGRLTRMPFMSGGYGNYVKITSGVIDMLFAHLKNFSKSPP
  USA300_FPR3757  RPFHEGVDFPFVYQEVRTPMGGRLTRMPFMSGGYGNYVKITSGVIDMLFAHLKNFSKSPP
                  ************************************************************
  
  N315            SGTMVKPGDVVGLTGNTGFSTGPHLHFEMRRNGRHFDPEPYLRNAKKKGRLSIGGGGATS
  Newman          SGTMVKPGDVVGLTGNTGFSTGPHLHFEMRRNGRHFDPEPYLRNAKKKGRLSIGGGGATS
  USA300_FPR3757  SGTMVKPGDVVGLTGNTGFSTGPHLHFEMRRNGRHFDPEPYLRNAKKKGRLSIGGGGATS
                  ************************************************************
  
  N315            GSGATYASRVIRQAQSILGGRYKGKWIHDQMMRVAKRESNYQSNAVNNWDINAQRGDPSR
  Newman          GSGATYASRVIRQAQSILGGRYKGKWIHDQMMRVAKRESNYQSNAVNNWDINAQRGDPSR
  USA300_FPR3757  GSGATYASRVIRQAQSILGGRYKGKWIHDQMMRVAKRESNYQSNAVNNWDINAQRGDPSR
                  ************************************************************
  
  N315            GLFQIIGSTFRANAKRGYTNFNNPVHQGISAMQYIVRRYGWDGFKRAGDYAYATGGKVFD
  Newman          GLFQIIGSTFRANAKRGYTNYNNPVHQGISAMQYIVRRYGWGGFKRAGDYAYATGGKVFD
  USA300_FPR3757  GLFQIIGSTFRANAKRGYTNFNNPVHQGISAMQYIVRRYGWDGFKRAGDYAYATGGKVFD
                  ********************:********************.******************
  
  N315            GWYNLGEDGHPEWVIPTDPARRNDAMKMLHYAAAEVRGKNASKNKRPSQLSSVNGFDDPS
  Newman          GWYNLGEDGHPEWIIPTDPARRNDAMKILHYAAAEVRGKKASKNKRPSQLSDLNGFDDPS
  USA300_FPR3757  GWYNLGEDGHPEWIIPTDPARRNDAMKMLHYAAAEVRGRKASKNKRPSQLSSVNGFDDPS
                  *************:*************:**********::***********.:*******
  
  N315            LLLKMIEQQQQQIALLLKIAQSNDVIADKDYQPIIDEYAFDKKVNASIEKRERQESTKVK
  Newman          LLLKMIEQQQQQIALLLKIAQSNDVIADKDYQPIIDEYAFDKKVNASIEKRERQESTKVK
  USA300_FPR3757  LLLKMIEQQQQQIALLLKIAQSNDVIADKDYQPIIDEYAFDKKVNASIEKRERQESTKVK
                  ************************************************************
  
  N315            FRKGGIAIQ
  Newman          FRKGGIAIQ
  USA300_FPR3757  FRKGGIAIQ
                  *********