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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005276000
- symbol?: agrD
- synonym:
- description?: cyclic lactone autoinducer peptide
- cyclic lactone autoinducer peptide
- accessory gene regulator protein D
- accessory gene regulator protein D autoinducer peptide precursor
- AgrD protein
- staphylococcal accessory gene regulator protein D
- Accessory gene regulator D (pheromone precursor, type II)
- accessory gene regulator D (pheromone precursor, type III)
- accessory gene regulator peptide AgrD
- AgrD family protein
- autoinducer peptide precursor
- Regulator protein agrD
- staphylococcal AgrD family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5443472..5443613
- synteny block?: BlockID0040770
- occurrence?: in 94% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1978 (agrD)
08BA02176:
C248_2041 (agrD)
11819-97:
—
6850:
RSAU_001870 (agrD)
71193:
ST398NM01_2074
ECT-R 2:
ECTR2_1888
ED133:
SAOV_2074
ED98:
SAAV_2085 (agrD)
HO 5096 0412:
SAEMRSA15_19450 (agrD)
JH1:
—
JH9:
SaurJH9_2074
JKD6008:
SAA6008_02075 (agrD)
JKD6159:
SAA6159_01950 (agrD)
LGA251:
SARLGA251_18390 (agrD)
M013:
M013TW_1989
MRSA252:
SAR2124 (agrD)
MSHR1132:
SAMSHR1132_18590
MSSA476:
SAS1942
Mu3:
SAHV_2022 (agrD)
Mu50:
SAV2037 (agrD)
MW2:
MW1961 (agrD)
RF122:
SAB1921 (agrD)
ST398:
SAPIG2074
T0131:
SAT0131_02184 (crtN)
TCH60:
HMPREF0772_11162 (agrD)
TW20:
SATW20_20200 (agrD)
USA300_TCH1516:
USA300HOU_2033 (agrD)
VC40:
SAVC_09065
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNTLFNLFFDFITGILKNIGNIAAYSTCDFIMDEVEVPKELTQLHE-
N315 MNTLVNMFFDFIIKLAKAIGIVGGVNACSSLFDEPKVPAELTNLYDK
NCTC8325 MNTLFNLFFDFITGILKNIGNIAAYSTCDFIMDEVEVPKELTQLHE-
Newman MNTLFNLFFDFITGILKNIGNIAAYSTCDFIMDEVEVPKELTQLHE-
USA300_FPR3757 MNTLFNLFFDFITGILKNIGNIAAYSTCDFIMDEVEVPKELTQLHE-
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