Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005287000
- symbol?: nrgA
- synonym:
- description?: ammonium transporter
- ammonium transporter
- ammonia permease
- ammonium transporter family protein
- ammonium transporter NrgA (Membrane protein nrgA) (Protein amtB)
- AMT family ammonium or ammonia transporter
- probabale ammonium transporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5451509..5452735
- synteny block?: BlockID0040870
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1984
08BA02176:
C248_2047
11819-97:
MS7_2054 (amt)
6850:
RSAU_001876 (amt)
71193:
ST398NM01_2081
ECT-R 2:
ECTR2_1894 (amt)
ED133:
SAOV_2080c
ED98:
SAAV_2091
HO 5096 0412:
SAEMRSA15_19510
JH1:
SaurJH1_2116
JH9:
SaurJH9_2080
JKD6008:
SAA6008_02081 (nrgA)
JKD6159:
SAA6159_01956 (nrgA)
LGA251:
SARLGA251_18450
M013:
M013TW_1995
MRSA252:
SAR2130
MSHR1132:
SAMSHR1132_18650
MSSA476:
SAS1948
Mu3:
SAHV_2028 (nrgA)
Mu50:
SAV2043 (nrgA)
MW2:
MW1967 (nrgA)
RF122:
SAB1927c
ST398:
SAPIG2081
T0131:
SAT0131_02193
TCH60:
HMPREF0772_11156 (amt)
TW20:
SATW20_20260
USA300_TCH1516:
USA300HOU_2040 (amtB)
VC40:
SAVC_09095
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNLNDTIFMFLCTLLVWLMTPGLSLFYGGLVESKNALNTVMQSMAAIVLVTFVWITVGFT
N315 MNLNDTIFMFLCTLLVWLMTPGLSLFYGGLVQSKNALNTVMQSMAAIVLVTFVWITVGFT
NCTC8325 MNLNDTIFMFLCTLLVWLMTPGLSLFYGGLVQSKNALNTVMQSMAAIVLVTFVWITVGFT
Newman MNLNDTIFMFLCTLLVWLMTPGLSLFYGGLVQSKNALNTVMQSMAAIVLVTFVWITVGFT
USA300_FPR3757 MNLNDTIFMFLCTLLVWLMTPGLSLFYGGLVQSKNALNTVMQSMAAIVLVTFVWITVGFT
*******************************:****************************
COL ISFGNGNLWFGNWEYTFLNHVGFATQEDISPHIPFALFMLFQMMFCTIAISILSGSIAEK
N315 ISFGNGNLWFGNWEYTFLNHVGFATQEDISPHIPFALFMLFQMMFCTIAISILSGSIAEK
NCTC8325 ISFGNGNLWFGNWEYTFLNHVGFATQEDISPHIPFALFMLFQMMFCTIAISILSGSIAEK
Newman ISFGNGNLWFGNWEYTFLNHVGFATQEDISPHIPFALFMLFQMMFCTIAISILSGSIAEK
USA300_FPR3757 ISFGNGNLWFGNWEYTFLNHVGFATQEDISPHIPFALFMLFQMMFCTIAISILSGSIAEK
************************************************************
COL MKFIPYLLFVVIWTALVYSPVAHWVWGGGWINKLGVLDFAGGTVVHITSGVSGLVLAIMI
N315 MKFIPYLLFVVIWTALVYSPVAHWVWGGGWINKLGVLDFAGGTVVHITSGVSGLVLAIMI
NCTC8325 MKFIPYLLFVVIWTALVYSPVAHWVWGGGWINKLGVLDFAGGTVVHITSGVSGLVLAIMI
Newman MKFIPYLLFVVIWTALVYSPVAHWVWGGGWINKLGVLDFAGGTVVHITSGVSGLVLAIMI
USA300_FPR3757 MKFIPYLLFVVIWTALVYSPVAHWVWGGGWINKLGVLDFAGGTVVHITSGVSGLVLAIMI
************************************************************
COL GKGNKHSESTPHNLIITLIGGIFVWIGWYGFNVGSAFTFDNIAMLAFTNTVISASAGAIG
N315 GKGNKHSESTPHNLIITLIGGIFVWIGWYGFNVGSAFTFDNIAMLAFTNTVISASAGAIG
NCTC8325 GKGNKHSESTPHNLIITLIGGIFVWIGWYGFNVGSAFTFDNIAMLAFTNTVISASAGAIG
Newman GKGNKHSESTPHNLIITLIGGIFVWIGWYGFNVGSAFTFDNIAMLAFTNTVISASAGAIG
USA300_FPR3757 GKGNKHSESTPHNLIITLIGGIFVWIGWYGFNVGSAFTFDNIAMLAFTNTVISASAGAIG
************************************************************
COL WLILEYIFKKTTSLLGLLLGALAGLVVITPAAGYVTYLSATIMALIGGICCYIVINYIKV
N315 WLILEYIFKKTTSLLGLLLGALAGLVVITPAAGYVTYLSATIMALIGGICCYIVINYIKV
NCTC8325 WLILEYIFKKTTSLLGLLLGALAGLVVITPAAGYVTYLSATIMALIGGICCYIVINYIKV
Newman WLILEYIFKKTTSLLGLLLGALAGLVVITPAAGYVTYLSATIMALIGGICCYIVINYIKV
USA300_FPR3757 WLILEYIFKKTTSLLGLLLGALAGLVVITPAAGYVTYLSATIMALIGGICCYIVINYIKV
************************************************************
COL KLKYHDALDAFGIHGVGGIIGAVLTAVFQSKKANPDIENGFIYTGDIHIILVQILCVTAV
N315 KLKYHDALDAFGIHGVGGIIGAVLTAVFQSKKANPDIENGFIYTGDIHIILVQILCVTAV
NCTC8325 KLKYHDALDAFGIHGVGGIIGAVLTAVFQSKKANPDIENGFIYTGDIHIILVQILCVTAV
Newman KLKYHDALDAFGIHGVGGIIGAVLTAVFQSKKANPDIENGFIYTGDIHIILVQILCVTAV
USA300_FPR3757 KLKYHDALDAFGIHGVGGIIGAVLTAVFQSKKANPDIENGFIYTGDIHIILVQILCVTAV
************************************************************
COL VIFSIVMTFIIAKVIKLITPLSVTEQETNIGLDKIVHGEHAYFEGELNRFNKHIRY
N315 VIFSIVMTFIIAKVIKLITPLSVTEQETNIGLDKIVHGEHAYFEGELNRFNKHIRY
NCTC8325 VIFSIVMTFIIAKVIKLITPLSVTEQETNIGLDKIVHGEHAYFEGELNRFNKHIRY
Newman VIFSIVMTFIIAKVIKLITPLSVTEQETNIGLDKIVHGEHAYFEGELNRFNKHIRY
USA300_FPR3757 VIFSIVMTFIIAKVIKLITPLSVTEQETNIGLDKIVHGEHAYFEGELNRFNKHIRY
********************************************************