PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005401000
• symbol^?: atpI
• synonym:
• description^?: ATP synthase

  descriptions from strain specific annotations:

  • ATP synthase
  • ATP synthase protein I, putative
  • ATP synthase I
  • ATP synthase I, AtpI
  • ATP synthase I chain family protein
  • putative ATP synthase protein I
• strand^?: -
• coordinates^?: 5562171..5562524
• synteny block^?: BlockID0041970
• occurrence^?: in 97% of 33 strains

⊟Orthologs

COL:
SACOL2102
N315:
SA1912
NCTC8325:
SAOUHSC_02351
Newman:
NWMN_2014
USA300_FPR3757:
—
04-02981:
SA2981_2050
08BA02176:
C248_2124 (atpI)
11819-97:
MS7_2126
6850:
RSAU_001948 (atpI)
71193:
ST398NM01_2152
ECT-R 2:
ECTR2_1966
ED133:
SAOV_2151c
ED98:
SAAV_2165
HO 5096 0412:
SAEMRSA15_20180 (atpI)
JH1:
SaurJH1_2184
JH9:
SaurJH9_2146
JKD6008:
SAA6008_02148 (atpI)
JKD6159:
SAA6159_02024 (atpI)
LGA251:
SARLGA251_19110 (atpI)
M013:
M013TW_2069
MRSA252:
SAR2198 (atpI)
MSHR1132:
SAMSHR1132_19330
MSSA476:
SAS2013
Mu3:
SAHV_2094
Mu50:
SAV2110
MW2:
MW2034
RF122:
SAB1994c (atpI)
ST398:
SAPIG2152
T0131:
SAT0131_02272
TCH60:
HMPREF0772_11081
TW20:
SATW20_22480 (atpI)
USA300_TCH1516:
USA300HOU_2100
VC40:
SAVC_09425

⊟Genome Viewer

COL
N315
NCTC8325
Newman

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             ---------------------------------MSRFYNIFKQFIQYYFYLIIILGGLYL
  N315            ---------------------------------MSRFYNIFKQFIQYYFYLIIILGGLYL
  NCTC8325        MNRIDTTNRLYYHLVCMSGTVFMIDISHTEAYKMSRFYNIFKQFIQYYFYLIIILGGLYL
  Newman          ---------------------------------MSRFYNIFKQFIQYYFYLIIILGGLYL
                                                   ***************************
  
  COL             YTHHAFILGLIIGVTGSAINTCIFECYLAKAKRPDTMHISTGNMWRYLVAIIACMIWYLN
  N315            YTHHAFILGLIIGVTGSAINTCIFECYLAKAKRPDTMHISTGNMWRYLVAIIACMIWYLN
  NCTC8325        YTHHAFILGLIIGVTGSAINTCIFECYLAKAKRPDTMHISTGNMWRYLVAIIACMIWYLN
  Newman          YTHHAFILGLIIGVTGSAINTCIFECYLAKAKRPDTMHISTGNMWRYLVAIIACMIWYLN
                  ************************************************************
  
  COL             KAHVSIIGIIIGLMISYVVVIIRPLLKVSK
  N315            KAHVSIIGIIIGLMISYVVVIIRPLLKVSK
  NCTC8325        KAHVSIIGIIIGLMISYVVVIIRPLLKVSK
  Newman          KAHVSIIGIIIGLMISYVVVIIRPLLKVSK
                  ******************************