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Summary[edit source | edit]

  • pan ID?: SAUPAN005440000
  • symbol?: manA
  • description?: mannose-6-phosphate isomerase

      descriptions from strain specific annotations:

    • mannose-6-phosphate isomerase
    • mannose-6-phosphate isomerase, class I
    • mannose-6 phosphate isomerase pmi
    • pseudogene
    • putative mannose-6-phosphate isomerase
  • strand?: -
  • coordinates?: 5598933..5600024
  • synteny block?: BlockID0042350
  • occurrence?: in 100% of 32 strains

Orthologs[edit source | edit]

    COL:
    SACOL2135 (manA1)
    N315:
    NCTC8325:
    Newman:
    NWMN_2047 (manA1)
    USA300_FPR3757:
    04-02981:
    SA2981_2083
    08BA02176:
    C248_2158
    11819-97:
    MS7_2161
    71193:
    ST398NM01_2185
    ECT-R 2:
    ECTR2_1999 (manA)
    ED133:
    SAOV_2182c
    ED98:
    SAAV_2198 (manA1)
    HO 5096 0412:
    SAEMRSA15_20510
    JH1:
    SaurJH1_2217
    JH9:
    SaurJH9_2179
    JKD6008:
    SAA6008_02182 (manA1)
    JKD6159:
    SAA6159_02057 (manA1)
    LGA251:
    SARLGA251_19440
    M013:
    M013TW_2103
    MRSA252:
    SAR2231
    MSHR1132:
    SAMSHR1132_19660
    MSSA476:
    SAS2046
    Mu3:
    SAHV_2127
    Mu50:
    SAV2143
    MW2:
    MW2067
    RF122:
    SAB2027c
    ST398:
    SAPIG2185 (manA)
    T0131:
    SAT0131_02308
    TCH60:
    HMPREF0772_11047 (pmi2)
    TW20:
    SATW20_22810
    USA300_TCH1516:
    USA300HOU_2132 (manA1)
    VC40:
    SAVC_09590

Genome Viewer[edit source | edit]

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

Alignments[edit source | edit]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.205)


    COL             MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI
    N315            MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI
    NCTC8325        M----------------------IQL-----GECWCVSAHPNGTSEIINGPYQGQTLDRI
    Newman          MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI
    USA300_FPR3757  MPLFLQPILKTKLWGGQRLSEFGYQLDNDTTGECWCVSAHPNGTSEIINGPYQGQTLDRI
                    *                       **     *****************************

    COL             WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE
    N315            WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE
    NCTC8325        WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE
    Newman          WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE
    USA300_FPR3757  WSEHRELFGDFPSKDFPLLTKIVDARESLSIHVHPDNSYAYEHENGQYGKSECWYIIDAE
                    ************************************************************

    COL             EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET
    N315            EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET
    NCTC8325        EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET
    Newman          EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET
    USA300_FPR3757  EDAEIVIGTLAESREEVANHVQHGTIESILRYIKVKPGEFYFIPAGTVHTISSGILAYET
                    ************************************************************

    COL             MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS
    N315            MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS
    NCTC8325        MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS
    Newman          MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS
    USA300_FPR3757  MQSSDITYRLYDFNRQDNQYNDRPLNIEKALDVIQYNAPLPNILPESEIIENHKCTHIVS
                    ************************************************************

    COL             NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV
    N315            NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV
    NCTC8325        NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV
    Newman          NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV
    USA300_FPR3757  NDFFTLVKWEISGTLNYMKPREFCLVTVLEGEGQMIVDGEIFKLTTGTNFILTSEDLDSV
                    ************************************************************

    COL             FEGDFTLMISYV
    N315            FEGDFTLMISYV
    NCTC8325        FEGDFTLMISYV
    Newman          FEGDFTLMISYV
    USA300_FPR3757  FEGDFTLMISYV
                    ************