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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005559000
- symbol?: —
- synonym:
- description?: hemolysin III
- hemolysin III
- hemolysin III, putative
- hemolysin III family protein
- putative hemolysin III
- channel, hemolysin III family protein
- hemolysin III channel protein
- hemolysin III family channel protein
- hemolysin III-like protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5701592..5702280
- synteny block?: BlockID0043190
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2108
08BA02176:
C248_2206
11819-97:
MS7_2193
6850:
RSAU_002014
71193:
ST398NM01_2230
ECT-R 2:
ECTR2_2031
ED133:
SAOV_2217c
ED98:
SAAV_2231
HO 5096 0412:
SAEMRSA15_20750
JH1:
SaurJH1_2239
JH9:
SaurJH9_2201
JKD6008:
SAA6008_02208
JKD6159:
SAA6159_02081
LGA251:
SARLGA251_19650
M013:
M013TW_2136
MRSA252:
SAR2261
MSHR1132:
SAMSHR1132_20020
MSSA476:
SAS2071
Mu3:
SAHV_2154
Mu50:
SAV2170
MW2:
MW2096
RF122:
SAB2051c
ST398:
SAPIG2230
T0131:
SAT0131_02339
TCH60:
HMPREF0772_11022
TW20:
SATW20_23050
USA300_TCH1516:
USA300HOU_2161
VC40:
SAVC_09720
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -MSKSTKKSNDTIVETFKDIIPLSFGEEIGNAASHGVAALLTLLVLPYAAVHSYIAHGTL
N315 MMSKSTKKSNDTIVETFKDIIPLSFGEEIGNAASHGVAALLTLLVLPYAAVHSYIAHGTL
NCTC8325 -MSKSTKKSNDTIVETFKDIIPLSFGEEIGNAASHGVAALLTLLVLPYAAVHSYIAHGTL
Newman MMSKSTKKSNDTIVETFKDIIPLSFGEEIGNAASHGVAALLTLLVLPYAAVHSYIAHGTL
USA300_FPR3757 -MSKSTKKSNDTIVETFKDIIPLSFGEEIGNAASHGVAALLTLLVLPYAAVHSYIAHGTL
***********************************************************
COL ASVSMSIYVISIFMMFISSTIYHSMQNETPHKYILRIIDHSMIYVAISGTYTPILLTVVG
N315 ASVSMSIYVISIFMMFISSTIYHSMQNETPHKYILRIIDHSMIYVAISGTYTPILLTVVG
NCTC8325 ASVSMSIYVISIFMMFISSTIYHSMQNETPHKYILRIIDHSMIYVAISGTYTPILLTVVG
Newman ASVSMSIYVISIFMMFISSTIYHSMQNETPHKYILRIIDHSMIYVAISGTYTPILLTVVG
USA300_FPR3757 ASVSMSIYVISIFMMFISSTIYHSMQNETPHKYILRIIDHSMIYVAISGTYTPILLTVVG
************************************************************
COL GWIGWTVFILLWGTTLWGILYKSIAVKVNQKLSLIVYLVMGWVGIILLPIIFIRTSWIFI
N315 GWIGWTVFILLWGTTLWGILYKSIAVKVNQKLSLIVYLVMGWVGIILLPIIFIRTSWIFI
NCTC8325 GWIGWTVFILLWGTTLWGILYKSIAVKVNQKLSLIVYLVMGWVGIILLPIIFIRTSWIFI
Newman GWIGWTVFILLWGTTLWGILYKSIAVKVNQKLSLIVYLVMGWVGIILLPIIFIRTSWIFI
USA300_FPR3757 GWIGWTVFILLWGTTLWGILYKSIAVKVNQKLSLIVYLVMGWVGIILLPIIFIRTSWIFI
************************************************************
COL LFIFLGGVSYTIGAWFYAQKNRPYFHMIWHIFIVIASLLHLIAILYFM
N315 LFIFLGGVSYTIGAWFYAQKNRPYFHMIWHIFIVIASLLHLIAILYFM
NCTC8325 LFIFLGGVSYTIGAWFYAQKNRPYFHMIWHIFIVIASLLHLIAILYFM
Newman LFIFLGGVSYTIGAWFYAQKNRPYFHMIWHIFIVIASLLHLIAILYFM
USA300_FPR3757 LFIFLGGVSYTIGAWFYAQKNRPYFHMIWHIFIVIASLLHLIAILYFM
************************************************