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Summary[edit | edit source]

  • pan ID?: SAUPAN005670000
  • symbol?: ecfT
  • synonym:
  • description?: energy-coupling factor transporter protein EcfT

      descriptions from strain specific annotations:

    • energy-coupling factor transporter protein EcfT
    • cobalt transport family protein
    • cobalt transport protein
    • cobalt transport protein, putative
    • energy-coupling factor transporter transmembrane protein EcfT
    • cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein
    • Transmembrane component of general energizing module of ECF transporters
    • CbiQ
    • cobalt ABC transporter permease
    • putative cobalt transport protein
  • strand?: -
  • coordinates?: 5792631..5793437
  • synteny block?: BlockID0044170
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2158
    08BA02176:
    C248_2256
    11819-97:
    MS7_2240 (ecfT)
    6850:
    RSAU_002056
    71193:
    ST398NM01_2273
    ECT-R 2:
    ECTR2_2082
    ED133:
    SAOV_2258c
    ED98:
    SAAV_2282
    HO 5096 0412:
    SAEMRSA15_21190
    JH1:
    SaurJH1_2288
    JH9:
    SaurJH9_2247
    JKD6008:
    SAA6008_02257
    JKD6159:
    SAA6159_02127
    LGA251:
    SARLGA251_20060
    M013:
    M013TW_2180
    MRSA252:
    SAR2303
    MSHR1132:
    SAMSHR1132_20460
    MSSA476:
    SAS2111
    Mu3:
    SAHV_2204
    Mu50:
    SAV2220
    MW2:
    MW2139
    RF122:
    SAB2093c
    ST398:
    SAPIG2273
    T0131:
    SAT0131_02393
    TCH60:
    HMPREF0772_10978
    TW20:
    SATW20_23540
    USA300_TCH1516:
    USA300HOU_2211
    VC40:
    SAVC_09970

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MKNKLIIGRYLPINSFVHHLDPRAKLMFVFLFIILIFFCHSPLTYLWVFALILFIMRLAK
    N315            MKNKLIIGRYLPINSFVHHLDPRAKLMFVFLFIILIFFCHSPLTYLWVFALILFIMRLAK
    NCTC8325        MKNKLIIGRYLPINSFVHHLDPRAKLMFVFLFIILIFFCHSPLTYLWVFALILFIMRLAK
    Newman          MKNKLIIGRYLPINSFVHHLDPRAKLMFVFLFIILIFFCHSPLTYLWVFALILFIMRLAK
    USA300_FPR3757  MKNKLIIGRYLPINSFVHHLDPRAKLMFVFLFIILIFFCHSPLTYLWVFALILFIMRLAK
                    ************************************************************

    COL             IQLWFLIKGLTPIFFFLIFTLMMHIFLTKGGYVLVEWHGITIETNGILEGLYISLRLIGI
    N315            IQLWFLIKGLTPIFFFLIFTLMMHIFLTKGGYVLVEWHGITIETNGILEGLYISLRLIGI
    NCTC8325        IQLWFLIKGLTPIFFFLIFTLMMHIFLTKGGYVLVEWHGITIETNGILEGLYISLRLIGI
    Newman          IQLWFLIKGLTPIFFFLIFTLMMHIFLTKGGYVLVEWHGITIETNGILEGLYISLRLIGI
    USA300_FPR3757  IQLWFLIKGLTPIFFFLIFTLMMHIFLTKGGYVLVEWHGITIETNGILEGLYISLRLIGI
                    ************************************************************

    COL             VMIATIMTLSTSPIDLTDAFERLLAPLKMFKLPVHQLSMIMSIALRFIPTLMDELDKIIL
    N315            VMIATIMTLSTSPIDLTDAFERLLAPLKMFKLPVHQLSMIMSIALRFIPTLMDELDKIIL
    NCTC8325        VMIATIMTLSTSPIDLTDAFERLLAPLKMFKLPVHQLSMIMSIALRFIPTLMDELDKIIL
    Newman          VMIATIMTLSTSPIDLTDAFERLLAPLKMFKLPVHQLSMIMSIALRFIPTLMDELDKIIL
    USA300_FPR3757  VMIATIMTLSTSPIDLTDAFERLLAPLKMFKLPVHQLSMIMSIALRFIPTLMDELDKIIL
                    ************************************************************

    COL             AQKSRGSEISSGNIATRIKSFIPLLVPLFISAFQRAEELAVAMEVRGYDANVKRTSYRQL
    N315            AQKSRGSEISSGNIATRIKSFIPLLVPLFISAFQRAEELAVAMEVRGYDANVKRTSYRQL
    NCTC8325        AQKSRGSEISSGNIATRIKSFIPLLVPLFISAFQRAEELAVAMEVRGYDANVKRTSYRQL
    Newman          AQKSRGSEISSGNIATRIKSFIPLLVPLFISAFQRAEELAVAMEVRGYDANVKRTSYRQL
    USA300_FPR3757  AQKSRGSEISSGNIATRIKSFIPLLVPLFISAFQRAEELAVAMEVRGYDANVKRTSYRQL
                    ************************************************************

    COL             KWQLRDTISLTMIIPIAIILFVLKYSGV
    N315            KWQLRDTISLTMIIPIAIILFVLKYSGV
    NCTC8325        KWQLRDTISLTMIIPIAIILFVLKYSGV
    Newman          KWQLRDTISLTMIIPIAIILFVLKYSGV
    USA300_FPR3757  KWQLRDTISLTMIIPIAIILFVLKYSGV
                    ****************************