⊟Summary

• pan ID^?: SAUPAN005790000
• symbol^?: —
• description^?: YafY family transcriptional regulator

  descriptions from strain specific annotations:

  • YafY family transcriptional regulator
  • DeoR family regulatory protein
  • DeoR family transcriptional regulator
  • deoR-like helix-turn-helix domain protein
  • helix-turn-helix, type 11 domain-containing protein
  • helix-turn-helix domain-containing protein
  • HTH domain family
  • regulatory protein DeoR family
  • transcriptional regulator
• strand^?: +
• coordinates^?: 5878055..5878756
• synteny block^?: BlockID0045350
• occurrence^?: in 100% of 32 strains

⊟Orthologs

COL:
SACOL2304
N315:
SA2105
NCTC8325:
SAOUHSC_02585
Newman:
NWMN_2213
USA300_FPR3757:
SAUSA300_2261
04-02981:
SA2981_2251
08BA02176:
C248_2354
11819-97:
MS7_2329
71193:
ST398NM01_2363
ECT-R 2:
ECTR2_2171
ED133:
SAOV_2352
ED98:
SAAV_2374
HO 5096 0412:
SAEMRSA15_22100
JH1:
SaurJH1_2379
JH9:
SaurJH9_2336
JKD6008:
SAA6008_02347
JKD6159:
SAA6159_02216
LGA251:
SARLGA251_20950
M013:
M013TW_2269
MRSA252:
SAR2396
MSHR1132:
SAMSHR1132_21370
MSSA476:
SAS2204
Mu3:
SAHV_2296
Mu50:
SAV2312
MW2:
MW2232
RF122:
SAB2189
ST398:
SAPIG2363
T0131:
SAT0131_02492
TCH60:
HMPREF0772_10883
TW20:
SATW20_24430
USA300_TCH1516:
USA300HOU_2294
VC40:
SAVC_10420

⊟Genome Viewer

COL chromosome
N315 chromosome
NCTC8325 chromosome
Newman chromosome
USA300_FPR3757 chromosome

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNKAERQNLIITAIQQNKKMTALELAKYCNVSKRTILRDIDDLENQGVKIYAHYGKNGGY
  N315            MNKAERQNLIITAIQQNKKMTALELAKYCNVSKRTILRDIDDLENQGVKIYAHYGKNGGY
  NCTC8325        MNKAERQNLIITAIQQNKKMTALELAKYCNVSKRTILRDIDDLENQGVKIYAHYGKNGGY
  Newman          MNKAERQNLIITAIQQNKKMTALELAKYCNVSKRTILRDIDDLENQGVKIYAHYGKNGGY
  USA300_FPR3757  MNKAERQNLIITAIQQNKKMTALELAKYCNVSKRTILRDIDDLENQGVKIYAHYGKNGGY
                  ************************************************************
  
  COL             QIQQAQSKIALNLSETQLSALFLVLNESQSYSTLPYKSEINAIIKQCLSLPQTRLRKLLK
  N315            QIQQAQSKIALNLSETQLSALFLVLNESQSYSTLPYKSEINAIIKQCLSLPQTRLRKLLK
  NCTC8325        QIQQAQSKIALNLSETQLSALFLVLNESQSYSTLPYKSEINAIIKQCLSLPQTRLRKLLK
  Newman          QIQQAQSKIALNLSETQLSALFLVLNESQSYSTLPYKSEINAIIKQCLSLPQTRLRKLLK
  USA300_FPR3757  QIQQAQSKIALNLSETQLSALFLVLNESQSYSTLPYKSEINAIIKQCLSLPQTRLRKLLK
                  ************************************************************
  
  COL             RMDFYIKFDDTQHMTLPMLFSDILIYCTERNVMLVDHRVDDNIKAENVIFIGLLCKHGHW
  N315            RMDFYIKFDDTQHMTLPMLFSDILIYCTERNVMLVDHRVDDNIKAENVIFIGLLCKHGHW
  NCTC8325        RMDFYIKFDDTQHMTLPMLFSDILIYCTERNVMLVDHRVDDNIKAENVIFIGLLCKHGHW
  Newman          RMDFYIKFDDTQHMTLPMLFSDILIYCTERNVMLVDHRVDDNIKAENVIFIGLLCKHGHW
  USA300_FPR3757  RMDFYIKFDDTQHMTLPMLFSDILIYCTERNVMLVDHRVDDNIKAENVIFIGLLCKHGHW
                  ************************************************************
  
  COL             HAVIYDIAQDKTAELEIENIIDISYSFGKTIQTRDISIDNYHQFLNPIDS
  N315            HAVIYDIAQDKTAELEIENIIDISYSFGKTIQTRDISIDNYHQFLNPIDS
  NCTC8325        HAVIYDIAQDKTAELEIENIIDISYSFGKTIQTRDISIDNYHQFLNPIDS
  Newman          HAVIYDIAQDKTAELEIENIIDISYSFGKTIQTRDISIDNYHQFLNPIDS
  USA300_FPR3757  HAVIYDIAQDKTAELEIENIIDISYSFGKTIQTRDISIDNYHQFLNPIDS
                  **************************************************