NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus USA300_FPR3757
• locus tag: SAUSA300_RS02430 [old locus tag: SAUSA300_0454 ]
• pan locus tag^?: SAUPAN002200000
• symbol: SAUSA300_RS02430
• pan gene symbol^?: recR
• synonym:
• product: recombination protein RecR

⊟Gene

⊟General

• type: CDS
• locus tag: SAUSA300_RS02430 [old locus tag: SAUSA300_0454 ]
• symbol: SAUSA300_RS02430
• product: recombination protein RecR
• replicon: chromosome
• strand: +
• coordinates: 511441..512037
• length: 597
• essential: unknown

⊟Accession numbers

• Location: NC_007793 (511441..512037) NCBI
• BioCyc:
• MicrobesOnline:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  421
  481
  541
  
  ATGCATTATCCAGAACCTATATCAAAACTTATTGATAGCTTTATGAAATTGCCAGGCATT
  GGTCCAAAGACAGCCCAACGTCTGGCTTTTCATACCTTAGATATGAAAGAAGACGATGTT
  GTTCAGTTTGCCAAAGCATTAGTAGATGTTAAGAGAGAATTAACATATTGTAGCGTATGT
  GGTCACATTACTGAAAATGATCCATGTTATATTTGTGAAGATAAGCAAAGAGATCGTTCA
  GTTATTTGTGTTGTGGAAGATGACAAAGATGTCATAGCTATGGAAAAAATGAGAGAATAC
  AAAGGTTTATATCACGTTTTACATGGGTCTATTTCGCCTATGGATGGCATTGGACCAGAA
  GATATTAATATTCCTTCATTGATTGAACGCTTGAAAAACGATGAAGTTAGCGAATTAATC
  TTAGCTATGAACCCGAACTTAGAGGGGGAATCTACAGCCATGTATATTTCTAGATTAGTT
  AAGCCTATAGGTATCAAAGTGACGAGATTAGCACAAGGGTTATCGGTAGGTGGCGATTTA
  GAGTATGCTGACGAAGTAACATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAA
  60
  120
  180
  240
  300
  360
  420
  480
  540
  597
  

⊟Protein

⊟General

• locus tag: SAUSA300_RS02430 [old locus tag: SAUSA300_0454 ]
• symbol: SAUSA300_RS02430
• description: recombination protein RecR
• length: 198
• theoretical pI: 4.75667
• theoretical MW: 22099.4
• GRAVY: -0.191414

⊟Function

• TIGRFAM:
  Genetic information processingDNA metabolismDNA replication, recombination, and repairrecombination protein RecR (TIGR00615; HMM-score: 290.7)
  and 1 more
  Genetic information processingDNA metabolismDNA replication, recombination, and repairHolliday junction DNA helicase RuvA (TIGR00084; EC 3.6.4.12; HMM-score: 11.4)
• TheSEED:
• PFAM:
  Toprim-like (CL0413) Toprim_4; Toprim domain (PF13662; HMM-score: 91.8)
  and 7 more
  no clan definedRecR; RecR protein (PF02132; HMM-score: 60)
  Toprim-like (CL0413) Toprim; Toprim domain (PF01751; HMM-score: 36.6)
  HHH (CL0198) HHH; Helix-hairpin-helix motif (PF00633; HMM-score: 22.4)
  HHH_5; Helix-hairpin-helix domain (PF14520; HMM-score: 19.6)
  HHH_8; Helix-hairpin-helix domain (PF14716; HMM-score: 15.1)
  IMS_HHH; IMS family HHH motif (PF11798; HMM-score: 14.1)
  RING (CL0229) Zn_ribbon_17; Zinc-ribbon, C4HC2 type (PF17120; HMM-score: 13.2)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: Cytoplasmic
  • Cytoplasmic Score: 7.5
  • Cytoplasmic Membrane Score: 1.15
  • Cellwall Score: 0.62
  • Extracellular Score: 0.73
  • Internal Helices: 0
• LocateP:
• SignalP: no predicted signal peptide
  • Ymax: 0.151
  • Ymax_pos: 28
  • Cmax: 0.128
  • Cmax_pos: 47
  • Smax: 0.328
  • Smax_pos: 24
  • Smean: 0.164
  • D: 0.156
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 446481302 NCBI
• RefSeq: WP_000559156 NCBI
• UniProt:

⊟Protein sequence

• MHYPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPSLIERLKNDEVSELILAMNPNLEGESTAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEVTLSKAIAGRTEM

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• SAUSA300_RS02430 no polycistronic organisation predicted

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

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