NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus USA300_FPR3757
• locus tag: SAUSA300_RS03900 [old locus tag: SAUSA300_0724 ]
• pan locus tag^?: SAUPAN002645000
• symbol: SAUSA300_RS03900
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: SAUSA300_RS03900 [old locus tag: SAUSA300_0724 ]
• symbol: SAUSA300_RS03900
• product: hypothetical protein
• replicon: chromosome
• strand: +
• coordinates: 804192..805070
• length: 879
• essential: unknown

⊟Accession numbers

• Location: NC_007793 (804192..805070) NCBI
• MicrobesOnline:

⊟Phenotype

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⊟DNA sequence

• 1
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  ATGAAAAAAATTGTTATTATCGCTGTTTTAGCGATTTTATTTGTAGTAATAAGTGCTTGT
  GGTAATAAAGAAAAAGAGGCACAACATCAATTTACTAAGCAATTTAAAGATGTTGAGCAA
  AAACAAAAAGAATTACAACATGTCATGGATAATATACATTTGAAAGAAATTGATCATCTA
  AGTAAAACTGATACAACTGATAAAAATAGTAAAGAATTTAAGGCACTACAAGAAGATGTT
  AAAAACCATCTCATACCTAAATTTGAAGCATATTATAAGTCAGCAAAAAATTTGCCTGAT
  GATACAATGAAAGTTAAGAAATTAAAAAAAGAATATATGACGCTTGCAAATGAGAAGAAG
  GATGCGATATATCAATTAAAAAAATTCATAGGTTTATGTAATCAATCTATCAAGTATAAC
  GAAGACATTTTAGATTATACGAAACAATTTGAAAAAAATAGATACAAAGTTGAATCAGAA
  ATTAAATTAGCTGATAATAAAAGTGAAGCAACTAATCTTACGACAAAATTAGAACATAAT
  AATAAAGCGTTAAGAGATACTGCGAAGAAGAACCTAGATGATAGTAAAGAAAATGAAGTA
  AAAGGCGCGATTAAAAATCACATTATGCCAATGATTGAAAAGCAAATTACCGATATTAAC
  CAAACTAATATTAGTGATAAGCATGTTAATAATGCAAGGAAAAACGCAATAGAAATGTAT
  TACAGTCTGCAGAACTATTATAATACACGTATTGAAACAATAAAGGTTAGTGAGAAGTTA
  TCAAAAGTCGATGTAGATAAGTTGCCGAAAAAGGGTATAGATATAACTCACGGCGATAAA
  GCCTTTGAAAAAAAGCTTGAAAAATTAGAAGAAAAATAA
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⊟Protein

⊟General

• locus tag: SAUSA300_RS03900 [old locus tag: SAUSA300_0724 ]
• symbol: SAUSA300_RS03900
• description: hypothetical protein
• length: 292
• theoretical pI: 9.71132
• theoretical MW: 34082
• GRAVY: -0.89726

⊟Function

• reaction:
• TIGRFAM:
  WXG100 family type VII secretion target (TIGR03930; HMM-score: 9.2)
  Cellular processesCellular processesCell divisioncell division protein FtsL (TIGR02209; HMM-score: 7.2)
  phage lysis regulatory protein, LysB family (TIGR03495; HMM-score: 6.8)
  Cellular processesCellular processesSporulation and germinationstage II sporulation protein R (TIGR02837; HMM-score: 4.4)
• TheSEED:
• PFAM:
  no clan definedIncA; IncA protein (PF04156; HMM-score: 16.3)
  Ca_hom_mod; Calcium homeostasis modulator (PF14798; HMM-score: 14.4)
  4HB_MCP (CL0457) TarH; Tar ligand binding domain homologue (PF02203; HMM-score: 13.3)
  no clan definedDMPK_coil; DMPK coiled coil domain like (PF08826; HMM-score: 13.3)
  DUF3008; Protein of unknwon function (DUF3008) (PF11450; HMM-score: 12.3)
  Ac76; Orf76 (Ac76) (PF05814; HMM-score: 7.6)

⊟Structure, modifications & interactions

• domains:
• modifications:
• cofactors:
• effectors:
• protein partners:

⊟Localization

• PSORTb: Cytoplasmic Membrane
  • Cytoplasmic Score: 0
  • Cytoplasmic Membrane Score: 4.6
  • Cellwall Score: 2.48
  • Extracellular Score: 2.92
  • Internal Helix: 1
• LocateP:
• SignalP: Signal peptide length 28 aa
  • Ymax: 0.49
  • Ymax_pos: 28
  • Cmax: 0.324
  • Cmax_pos: 28
  • Smax: 0.909
  • Smax_pos: 18
  • Smean: 0.766
  • D: 0.597
• predicted transmembrane helices (TMHMM): 1

⊟Accession numbers

• GI: 446647541 NCBI
• RefSeq: WP_000724887 NCBI
• UniProt:

⊟Protein sequence

• MKKIVIIAVLAILFVVISACGNKEKEAQHQFTKQFKDVEQKQKELQHVMDNIHLKEIDHLSKTDTTDKNSKEFKALQEDVKNHLIPKFEAYYKSAKNLPDDTMKVKKLKKEYMTLANEKKDAIYQLKKFIGLCNQSIKYNEDILDYTKQFEKNRYKVESEIKLADNKSEATNLTTKLEHNNKALRDTAKKNLDDSKENEVKGAIKNHIMPMIEKQITDINQTNISDKHVNNARKNAIEMYYSLQNYYNTRIETIKVSEKLSKVDVDKLPKKGIDITHGDKAFEKKLEKLEEK

⊟Experimental data

• experimentally validated: no data available

⊟Expression & Regulation

⊟Operon

• SAUSA300_RS03900 no polycistronic organisation predicted

⊟Regulation

• sigma factor:
• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

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