NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS11180 [old locus tag: SAUSA300_2032 ]
- pan locus tag?: SAUPAN005347000
- symbol: SAUSA300_RS11180
- pan gene symbol?: kdpC
- synonym:
- product: potassium-transporting ATPase subunit C
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: SAUSA300_RS11180 [old locus tag: SAUSA300_2032 ]
- symbol: SAUSA300_RS11180
- product: potassium-transporting ATPase subunit C
- replicon: chromosome
- strand: -
- coordinates: 2192950..2193510
- length: 561
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_007793 (2192950..2193510) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
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541ATGAATACGATAAGAAATAGTATTTGTTTAACGATAATAACTATGGTATTATGTGGATTT
TTATTCCCGTTAGCTATCACGTTAATTGGTCAAATATTTTTTTATCAACAAGCAAATGGC
AGTTTAATTACGTATGACAATCGTATAGTTGGATCAAAATTGATTGGACAGCACTGGACA
GAGACACGATATTTTCACGGGAGACCGAGTGCAGTTGATTATAATATGAATCCTGAAAAA
TTATATAAAAACGGCGTATCTTCAGGTGGAAGTAATGAATCGAATGGAAACACCGAATTA
ATAGCACGCATGAAACATCATGTTAAATTTGGGAATTCAAATGTAACAATAGATGCTGCA
ACAAGTTCTGGGTCGGGCTTAGATCCGCATATTACGGTCGAAAATGCATTGAAGCAAGCA
CCTCGTATTGCTGATGCTCGTCATGTATCTACTTCAAGAGTGGCCGACTTGATTCAACAT
CGTAAGCAGCGTGGTGTGTTAACAAATGATTATGTGAATGTGCTTGAACTAAATATCGCT
CTTGATAAGATGAAAGATTGA60
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⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: SAUSA300_RS11180 [old locus tag: SAUSA300_2032 ]
- symbol: SAUSA300_RS11180
- description: potassium-transporting ATPase subunit C
- length: 186
- theoretical pI: 9.40539
- theoretical MW: 20618.4
- GRAVY: -0.225806
⊟Function[edit source | edit]
- reaction: EC 3.6.3.12? ExPASyPotassium-transporting ATPaseATP + H2O + K+(Out) = ADP + phosphate + K+(In)
- TIGRFAM: Transport and binding proteinsCations and iron carrying compoundsK+-transporting ATPase, C subunit (TIGR00681; EC 3.6.3.12; HMM-score: 166.8)
- TheSEED:
- PFAM: no clan definedKdpC; K+-transporting ATPase, c chain (PF02669; HMM-score: 193.5)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 9.68
- Cellwall Score: 0.17
- Extracellular Score: 0.16
- Internal Helix: 1
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.218
- Ymax_pos: 13
- Cmax: 0.122
- Cmax_pos: 41
- Smax: 0.636
- Smax_pos: 7
- Smean: 0.483
- D: 0.322
- predicted transmembrane helices (TMHMM): 1
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MNTIRNSICLTIITMVLCGFLFPLAITLIGQIFFYQQANGSLITYDNRIVGSKLIGQHWTETRYFHGRPSAVDYNMNPEKLYKNGVSSGGSNESNGNTELIARMKHHVKFGNSNVTIDAATSSGSGLDPHITVENALKQAPRIADARHVSTSRVADLIQHRKQRGVLTNDYVNVLELNIALDKMKD
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- SAUSA300_RS11180 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]