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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS02310 [old locus tag: SA0404 ]
  • pan locus tag?: SAUPAN002145000
  • symbol: SA_RS02310
  • pan gene symbol?: lpl8
  • synonym:
  • product: tandem-type lipoprotein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SA_RS02310 [old locus tag: SA0404 ]
  • symbol: SA_RS02310
  • product: tandem-type lipoprotein
  • replicon: chromosome
  • strand: +
  • coordinates: 463725..464507
  • length: 783
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002745 (463725..464507) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    ATGAAGTCTATAAAAAGGATTGGATTGTGCATAAGTCTGTTGATTTTAATCATTTTTGCA
    ACATCTTGTGGTAGTAATAAGATTACTGGAGACTCAAAAGAAGAACAAATCAAAAAGAGT
    TTTGCGAAATCTTTAGACAAGTATCCTACTGAAAATCTAGAAGAGTTTTATGATAAAGAA
    GGATATAGAGATGGAGAATTTGAAAAAGATGATAAAGGGACTTGGCTAATTAGATCTGAA
    ATGAAAATCCAATTAAAAGGAGAAAATCTGGAATCTAGGGGAGCAGTTATAGAAATTAAC
    AGAAATACTAGAACGGCTAAAGGGAATTATATTGTTAGAGAAGTTGTTGAAGATAGCGAT
    GGAATGACACACAATCATACAAAAAGGTATCCTGTGAAAATGGAAAATAATAAAATGATT
    CCATTAAAATCAATTGATGATGAAAAAGTAAAAAAAGAAATTGAAGAATTTAAATTCTTT
    GTACAATACGGGAATTTCAAAGAATTGGAAAACTATAAAGAGGACGAAGTGTCATATAAC
    CCAGAAGTACCAATATACTCTGCACAATATCAATTGAAAAACAGTGATTATAATGTAGAG
    CAATTACGTAAGCGATATAATATCCCGACGCAAAAAGCGCCCAAATTATTATTGAAAGGC
    TCAGGTAATTTAAAAGGTTCATCAGTCGGATATAAAAATATTGAATTTACCTTTGTTGAA
    AATAAGGAAGAAAATATTTACTTCACAGATAGTGTCTACTTTAATCCAAGCGAGGATAAA
    TAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    783

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA_RS02310 [old locus tag: SA0404 ]
  • symbol: SA_RS02310
  • description: tandem-type lipoprotein
  • length: 260
  • theoretical pI: 6.57845
  • theoretical MW: 30311.1
  • GRAVY: -0.856154

Function[edit source | edit]

  • TIGRFAM:
    Staphylococcus tandem lipoproteins (TIGR01742; HMM-score: 347.8)
  • TheSEED:
  • PFAM:
    LolA_LolB (CL0048) DUF576; Csa1 family (PF04507; HMM-score: 417.5)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 4.6
    • Cellwall Score: 2.48
    • Extracellular Score: 2.92
    • Internal Helix: 1
  • LocateP:
  • SignalP: Signal peptide length 31 aa
    • Ymax: 0.409
    • Ymax_pos: 31
    • Cmax: 0.278
    • Cmax_pos: 31
    • Smax: 0.878
    • Smax_pos: 19
    • Smean: 0.684
    • D: 0.516
  • predicted transmembrane helices (TMHMM): 1

Accession numbers[edit source | edit]

  • GI: 446758715 NCBI
  • RefSeq: WP_000835971 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MKSIKRIGLCISLLILIIFATSCGSNKITGDSKEEQIKKSFAKSLDKYPTENLEEFYDKEGYRDGEFEKDDKGTWLIRSEMKIQLKGENLESRGAVIEINRNTRTAKGNYIVREVVEDSDGMTHNHTKRYPVKMENNKMIPLKSIDDEKVKKEIEEFKFFVQYGNFKELENYKEDEVSYNPEVPIYSAQYQLKNSDYNVEQLRKRYNIPTQKAPKLLLKGSGNLKGSSVGYKNIEFTFVENKEENIYFTDSVYFNPSEDK

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SA_RS02310 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]