NCBI: 02-MAR-2017
Contents
⊟Summary[edit source | edit]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS03955 [old locus tag: SA0694 ]
- pan locus tag?: SAUPAN002644000
- symbol: SA_RS03955
- pan gene symbol?: —
- synonym:
- product: GrpB family protein
⊟Genome View[edit source | edit]
⊟Gene[edit source | edit]
⊟General[edit source | edit]
- type: CDS
- locus tag: SA_RS03955 [old locus tag: SA0694 ]
- symbol: SA_RS03955
- product: GrpB family protein
- replicon: chromosome
- strand: -
- coordinates: 792558..793076
- length: 519
- essential: unknown
⊟Accession numbers[edit source | edit]
- Location: NC_002745 (792558..793076) NCBI
- MicrobesOnline:
⊟Phenotype[edit source | edit]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit source | edit]
- 1
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481ATGTATTCAAATGTTCAACCATTCATTAATAGTGATTTAACTAATTGTTTTCAATCACAA
TACACTGAAATTGAATCATTATTATTCAACCTCTTAGACAGCCCAGTAAAATATACAAAA
CATATTGGCGGTACGCATCATTTTAAATATTCAACAGAGCCAATTTTAGATATTTTAGTA
GGTGTAGAAAATTTGCATGATATTACATCCTTAGATGAAAAACGCTTAAATTATGTAGGG
TTTTATCGTTTGCATCATAAATATACTAAGAAAGTTATGATGGCGAAGTTTAACAATTTT
CATGAACTAAAACAACAGGTGCGTCTACATATCATTCAAATGAATACCCAAACATTTGAA
TCTTATCTTGCACTTGATTACCTCTTATCAACTAATGATGATATTGCTTTGCAATTCAAT
ACAAAAAAGCACCAAATATTGCAACATAGCTTAACAATTAGACAATATGAGATGCAAAAG
CAACAATACTTTGAAAAACTATGTAAAAAATACTTATAA60
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⊟Protein[edit source | edit]
⊟General[edit source | edit]
- locus tag: SA_RS03955 [old locus tag: SA0694 ]
- symbol: SA_RS03955
- description: GrpB family protein
- length: 172
- theoretical pI: 8.60072
- theoretical MW: 20605.5
- GRAVY: -0.485465
⊟Function[edit source | edit]
- reaction:
- TIGRFAM:
- TheSEED:
- PFAM: NTP_transf (CL0260) GrpB; GrpB protein (PF04229; HMM-score: 75.5)no clan definedT4_Gp59_C; T4 gene Gp59 loader of gp41 DNA helicase C-term (PF08994; HMM-score: 15.1)DUF4517; Domain of unknown function (DUF4517) (PF15006; HMM-score: 14.4)
⊟Structure, modifications & interactions[edit source | edit]
- domains:
- modifications:
- cofactors:
- effectors:
- protein partners:
⊟Localization[edit source | edit]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- Ymax: 0.106
- Ymax_pos: 45
- Cmax: 0.119
- Cmax_pos: 20
- Smax: 0.143
- Smax_pos: 42
- Smean: 0.095
- D: 0.102
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit source | edit]
⊟Protein sequence[edit source | edit]
- MYSNVQPFINSDLTNCFQSQYTEIESLLFNLLDSPVKYTKHIGGTHHFKYSTEPILDILVGVENLHDITSLDEKRLNYVGFYRLHHKYTKKVMMAKFNNFHELKQQVRLHIIQMNTQTFESYLALDYLLSTNDDIALQFNTKKHQILQHSLTIRQYEMQKQQYFEKLCKKYL
⊟Experimental data[edit source | edit]
- experimentally validated: no data available
⊟Expression & Regulation[edit source | edit]
⊟Operon[edit source | edit]
- SA_RS03955 no polycistronic organisation predicted
⊟Regulation[edit source | edit]
- sigma factor:
- regulator:
⊟Transcription pattern[edit source | edit]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit source | edit]
- Aureolib: no data available
⊟Protein stability[edit source | edit]
- half-life: no data available
⊟Biological Material[edit source | edit]
⊟Mutants[edit source | edit]
⊟Expression vector[edit source | edit]
⊟lacZ fusion[edit source | edit]
⊟GFP fusion[edit source | edit]
⊟two-hybrid system[edit source | edit]
⊟FLAG-tag construct[edit source | edit]
⊟Antibody[edit source | edit]
⊟Other Information[edit source | edit]
You are kindly invited to share additional interesting facts.
⊟Literature[edit source | edit]
⊟References[edit source | edit]
⊟Relevant publications[edit source | edit]