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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS14010 [old locus tag: SA2445 ]
  • pan locus tag?: SAUPAN006387000
  • symbol: SA_RS14010
  • pan gene symbol?: asp1
  • synonym:
  • product: accessory Sec system protein Asp1

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: SA_RS14010 [old locus tag: SA2445 ]
  • symbol: SA_RS14010
  • product: accessory Sec system protein Asp1
  • replicon: chromosome
  • strand: -
  • coordinates: 2752348..2753901
  • length: 1554
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_002745 (2752348..2753901) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
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    481
    541
    601
    661
    721
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    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGAAATACTTTATTCCAGCTTGGTACGATGACCAACGATGGTGGCAAGACACGACTGTG
    CCGTATTATCAACTACAAAATAAGACGGAATTTGACGATATGATTAGTTTAATGGGAATG
    CACCTTGAAAATGACTTAGATTATCAACTGATTGTTCTCAATCATGCACCAAATTTAAGA
    ACATTTTTACATCGATATGACTTATATGAAACAAAGTATTCGTCTGTGTTTGATGAAATT
    CAAGGATTCAGTCACCATGCGCCACAAGCGATTAATTATCATCACTTAAAATGGCCGGAT
    GATGTTGAGTTTGTGTACACGCCGTATTTATTAAAATGTGTGACGAGTGAACAGACCTAT
    ACAAATATTTATTTTAGTCAAGAAGGGTATTCAATTTGGTTTGAAGAATTTGAAAGAGAT
    CAGTTACAACGGCGTTATATTTTTGATGACAGAGGTTATTTATCAGCGATACGTTATTTT
    GATGATCAGGGAGAGGCTTCTTACCAACAATATTTAACGATTAATGGAGATTGTGTACTT
    CATGAAGATTTGAAAAATGGCAGAGTCACTGTATCAAAAAGATATCAACATCACTATCAA
    CAAACAGAATATAACAATATGGCTCAACTAATTGAAGAAAAATTTCAAGCAATGATTGCA
    CAACAAATACATGAAGATGATCATGTGATTGTGGCTTCAGATGCTAGGCACAATCGACAA
    ATAGCCAATCATATTCCAGCGAAATTGTTAAGTTATTCATTTTTTAAAAATAGAAATGAA
    ACTGTGTCAGATGAGGAATATCAATCTATCGTAAAGAATGCCCATTTAATTGTTGATAGT
    ATGCAACTAGAACGTGATTTAATTAGTCATCAAGAGAAGTATCAGCGGGAGAATACAATG
    ATTCGAATCACACCATTTGAAACGAGACAATCACCTAATATAAGTAGTCAATTGATGGAA
    ACATTTATAGGTGTATGGATAGATGGTATGAGTGACGCTGATTTGCAACAAATGATGCAA
    CGACTTGTGGATTATATCGCACAGGAAGATTATTACCGTTTAATTTTATTATCGCGCCAT
    CAAAATGACATACCGATGTGGCTTCGTGAATGTATTACGTCGGTAAATGAGGAATACCAA
    GCTAAACAGAATGCGGATGTTAATGTTTCAGCATTAATGACACCTGAAGATCAAGATGAC
    ATCATTGCTGTTAAGACGATACATGCTGAACATGATGTTGTAGAAGCATTGCGGACGTTG
    CGACTTGTGATAGATATGTCAAAAGAACCTGATTTGTATTTACAAATTAGTGCAATTAGC
    GCTGGGATTCCACAAATTAATGGTCAACAAACAGATTACGTCTCTGATTATGACAATGGC
    CGTATTATAAATACAGTTGATGAATTAGATGATGCGTTAAATTATTATTTATTTTATTTG
    AAAAATTGGAATTATGCGTACGCCTATTCTTTAAAATTAATAGATGCATATGCTTCTAAG
    AATATTATTAATCAGCTCGATGAGTTAATAGAAGGTGAAAATGATGCCACGTAA
    60
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    1260
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    1554

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: SA_RS14010 [old locus tag: SA2445 ]
  • symbol: SA_RS14010
  • description: accessory Sec system protein Asp1
  • length: 517
  • theoretical pI: 4.45506
  • theoretical MW: 61315.9
  • GRAVY: -0.581044

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    Cellular processesCellular processesPathogenesisaccessory Sec system protein Asp1 (TIGR03713; HMM-score: 730.2)
    Genetic information processingProtein fateProtein and peptide secretion and traffickingaccessory Sec system protein Asp1 (TIGR03713; HMM-score: 730.2)
  • TheSEED:
  • PFAM:
    GT-B (CL0113) Asp1; Accessory Sec system protein Asp1 (PF16993; HMM-score: 359.8)
    no clan definedVasohibin; Vasohibin (PF14822; HMM-score: 14.6)
    Ntox16; Novel toxin 16 (PF15523; HMM-score: 13.3)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.084
    • Ymax_pos: 70
    • Cmax: 0.1
    • Cmax_pos: 33
    • Smax: 0.092
    • Smax_pos: 65
    • Smean: 0.052
    • D: 0.072
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446795946 NCBI
  • RefSeq: WP_000873202 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MKYFIPAWYDDQRWWQDTTVPYYQLQNKTEFDDMISLMGMHLENDLDYQLIVLNHAPNLRTFLHRYDLYETKYSSVFDEIQGFSHHAPQAINYHHLKWPDDVEFVYTPYLLKCVTSEQTYTNIYFSQEGYSIWFEEFERDQLQRRYIFDDRGYLSAIRYFDDQGEASYQQYLTINGDCVLHEDLKNGRVTVSKRYQHHYQQTEYNNMAQLIEEKFQAMIAQQIHEDDHVIVASDARHNRQIANHIPAKLLSYSFFKNRNETVSDEEYQSIVKNAHLIVDSMQLERDLISHQEKYQRENTMIRITPFETRQSPNISSQLMETFIGVWIDGMSDADLQQMMQRLVDYIAQEDYYRLILLSRHQNDIPMWLRECITSVNEEYQAKQNADVNVSALMTPEDQDDIIAVKTIHAEHDVVEALRTLRLVIDMSKEPDLYLQISAISAGIPQINGQQTDYVSDYDNGRIINTVDELDDALNYYLFYLKNWNYAYAYSLKLIDAYASKNIINQLDELIEGENDAT

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • SA_RS14010 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]