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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus Newman
- locus tag: NWMN_RS11465 [old locus tag: NWMN_1982 ]
- pan locus tag?: SAUPAN005349000
- symbol: NWMN_RS11465
- pan gene symbol?: kdpA
- synonym:
- product: potassium-transporting ATPase A chain
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: NWMN_RS11465 [old locus tag: NWMN_1982 ]
- symbol: NWMN_RS11465
- product: potassium-transporting ATPase A chain
- replicon: chromosome
- strand: -
- coordinates: 2200157..2201833
- length: 1677
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1621ATGGAAATAATTTTGTTTCTAACAATGATGGTTATGATTACGTATGTTTTTAGTGGATAT
CTATATCGCGTAGCATTGGTGCAATCGTCAAGAGTAGATTTAATATTTACTAGATTTGAA
AATATGTGTTTTAAAATTATCGGCACAGATTTAGAACACATGTCAGCTAAAACATATGTC
AAACATTTTCTGGCATTTAATGGATTTATGGGGTTTATAACATTTGTATTGCTAATAGTT
CAGCAATGGCTTTTTTTAAATCCAAATCATAATTTAAACCAATCGATAGATTTAGCGTTT
AATACAGCAATATCTTTTTTAACAAATAGTAATTTACAACACTATAACGGTGAATCAGAT
GTGACATATTTAACGCAAATGATTGTAATGACATATTTAATGTTTACATCTAGTGCATCA
GGTTACGCCGTTTGTATAGCGATGTTGAGACGTTTAACTGGATTAACTAATATCATTGGT
AATTTTTATCAAGATATTGTTCGGTTTATTGTCCGAGTACTTTTACCATTATCATGTTTA
ATTAGTATTTTATTGATGACTCAAGGTGTACCACAAACGTTGCATGCTAATTTAATGATT
CGGACTTTAAGCGGACATATTCAACATATTGCATTTGGACCTATTGCATCACTTGAATCA
ATAAAACATCTTGGTACGAATGGTGGAGGATTTTTAGCAGGAAATTCTGCAACACCTTTT
GAAAATCCAAATATTTGGAGCAATTTTATAGAAATGGGCAGTATGATGTTACTTCCTATG
TCAATGTTGTTCTTATTTGGTCGCATGTTAAGTAGACATGGTAAACGAGTACATCGTCAT
GCGTTGATATTATTTGTCGCAATGTTTTTCATTTTTATAGCAATTCTTACATTAACTATG
TGGAGTGAGTATCGTGGTAATCCAATACTAGCGAATTTAGGCATTTATGGACCGAATATG
GAAGGTAAAGAGGTACGGTTTGGAGCAGGTTTGTCAGCACTATTTACAGTTATTACGACG
GCATTTACAACGGGTTCTGTTAATAACATGCATGATAGCTTAACGCCTATAGGTGGATTA
GGACCAATGGTATTAATGATGCTAAATGTTGTATTTGGTGGCGAAGGCGTAGGACTCATG
AATTTATTGATATTTGTCTTACTGACGGTGTTTATATGCAGTTTGATGGTTGGTAAAACA
CCAGAATATTTAAATATGCCAATTGGCGCCCGTGAAATGAAATGTATTGTCTTAGTCTTT
CTCATACACCCAATTTTAATTTTAGTATTTTCAGCACTTGCTTTTATGATTCCTGGAGCA
AGTGAAAGTATAACGAATCCGTCTTTTCATGGTATTTCACAAGTTATGTATGAAATGACA
TCAGCTGCTGCGAACAATGGATCAGGGTTTGAAGGACTGAAAGATGATACAACATTCTGG
AATATCTCTACAGGAATCATTATGTTGCTTTCTCGTTATATACCAATTATTTTGCAATTA
ATGATTGCATCAAGTTTAGTGAATAAAAAATCATACCATCAAGATAAATATACAATAGCG
ATTGATAAACCTTATTTTGGCGTATCACTAATCGTATTTATCGTTTTACTAAGTGGTTTG
ACATTTATTCCAGTACTATTACTTGGTCCTATTGGTGAATTTTTAACTTTAAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: NWMN_RS11465 [old locus tag: NWMN_1982 ]
- symbol: NWMN_RS11465
- description: potassium-transporting ATPase A chain
- length: 558
- theoretical pI: 8.44178
- theoretical MW: 62025.5
- GRAVY: 0.688351
⊟Function[edit | edit source]
- reaction: EC 3.6.3.12? ExPASyPotassium-transporting ATPase ATP + H2O + K+(Out) = ADP + phosphate + K+(In)
- TIGRFAM: Transport and binding proteins Cations and iron carrying compounds K+-transporting ATPase, A subunit (TIGR00680; EC 3.6.3.12; HMM-score: 580.7)
- TheSEED: data available for COL, N315, NCTC8325, USA300_FPR3757
- PFAM: Ion_channel (CL0030) KdpA; Potassium-transporting ATPase A subunit (PF03814; HMM-score: 706.7)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 12
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.087662
- TAT(Tat/SPI): 0.001003
- LIPO(Sec/SPII): 0.017459
- predicted transmembrane helices (TMHMM): 12
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MEIILFLTMMVMITYVFSGYLYRVALVQSSRVDLIFTRFENMCFKIIGTDLEHMSAKTYVKHFLAFNGFMGFITFVLLIVQQWLFLNPNHNLNQSIDLAFNTAISFLTNSNLQHYNGESDVTYLTQMIVMTYLMFTSSASGYAVCIAMLRRLTGLTNIIGNFYQDIVRFIVRVLLPLSCLISILLMTQGVPQTLHANLMIRTLSGHIQHIAFGPIASLESIKHLGTNGGGFLAGNSATPFENPNIWSNFIEMGSMMLLPMSMLFLFGRMLSRHGKRVHRHALILFVAMFFIFIAILTLTMWSEYRGNPILANLGIYGPNMEGKEVRFGAGLSALFTVITTAFTTGSVNNMHDSLTPIGGLGPMVLMMLNVVFGGEGVGLMNLLIFVLLTVFICSLMVGKTPEYLNMPIGAREMKCIVLVFLIHPILILVFSALAFMIPGASESITNPSFHGISQVMYEMTSAAANNGSGFEGLKDDTTFWNISTGIIMLLSRYIPIILQLMIASSLVNKKSYHQDKYTIAIDKPYFGVSLIVFIVLLSGLTFIPVLLLGPIGEFLTLK
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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