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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA0059 [new locus tag: SA_RS00440 ]
- pan locus tag?: SAUPAN000446000
- symbol: SA0059
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA0059 [new locus tag: SA_RS00440 ]
- symbol: SA0059
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 66630..68423
- length: 1794
- essential: no DEG
⊟Accession numbers[edit | edit source]
- Gene ID: 1122833 NCBI
- RefSeq: NP_373299 NCBI
- BioCyc: see SA_RS00440
- MicrobesOnline: 102325 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1741ATGACTCAAACTAACCCTTCATTTAATCCTTCACCACGATACAAATCAAAAAAAGGTTGG
TATAAAGACAAGCCTCCCAAAGAAAAAGGAGGAATGCCTACTGAAGTTGAAATCGCAGGT
CCTATCGTTATCGAAAATAAGTTTATTGACCCTAAAACTAACACTGAAAAAGTAATTATT
ACAGACGAGGATCAAAAAGAAATTGTTGAATCTAGTGATATTTTAACAACACAAAAACTG
CCATCTTTAATGAAGTATGGATTTAGTATTAATGAAAAATATACAAAAGATTTAGGTTAT
GCGTTGCAACAAATGCGCAATCAATTACCCATTTCCTACTTATATGAAGGGGTAGGTATA
CTGGAAACACCGTTTGGTCCTATTGTATCGTTAAGTGAAATCTATACTACTAAAGAATTT
GATAATAAATCTCCATCTGACGCCATTTGTGATAATGCTTATGACTTAACTCCTAAAGGT
ACATTTGATAATTGGTTTAACATGTATCTAAAAGAGGTTAAAGGTTCTCTTCTTTTAGAA
TTAGCAGTCGTATTTGGTATTTCTGCCTTAGTGACGAGTTTCCTGAAGCACAAACATGAA
ACCGAATTTGCCGGAATCATTTTTAGTTTTACAGGTCAATCCTCAACCGGTAAGTCAACT
GCAGCTTCTTTAGCTGTATCAGTCGCTGGTAACCCTACCAAAGGTAATGAAACTCTCTTT
AGAAATTGGAATGCCACACGTAATGCACTTGAAGGTTACTTGAGTAACAATTTTGGTATA
CCTATTGTATTTGATGAACTCTCATCAGCAACTTTTAGAGATACAACGGGGTTATTGTAC
TCCATCACTGAAGGTCAAGGTCGTCAACGTTCAAACGTTCATGGAGAAGTTAAAACGCCT
AAGAATTGGGGTACTTCTGTCATTTCAACGTCAGAACACAGTATTTTTAATGATTCAGCT
CAAAACGATGGATTACGTGTAAGAACCATCGAGATTAATGAACAATTCACTACAAATGCG
ACCAATGCTGACAATATTAAAAAAGCTGTAGCACTAAACTATGGTCATGTTTTACCGTTA
GTAGCTAAATATCTTATAAATCGTGAAGATGAAGTTATTCAATGGTTTTACAAGGAAGTA
GATTGGTTTGAAGCTAAATTGAAAGATGATAAAAGCAACACAGGCAATCGTATGTTTAAG
CGTTATGCAGTCATTACAACATCTGCAAAAATATTAGGTCGTGTTTTAGCTACAGATATT
GATATCGCTAAAATAAGAGACTACTTTATTGATTATCATGGTCATACAATCTCTGAACGC
TCATTAGCTGATAAAGCTATCGATGTCATCATTCAATTTGTAGCACAAAACAGAGGTAAG
TTTTCAGATGAAGGTGCTTTGAAAAATATGTTTGAGAACTATGGATTAATCTCATTAAAA
GATGACCATATCGAAGTAAAAATGATTGCAAACGTTTTTAAACAGATGCTAAACAATCAT
CAATTTCAAGATGTTAATAATGTTGTCAACGCCTTAAGAGATAAAGGTTTCATATTAGCT
GACCGTGGACGCCAAACAACTAAAAGAAGTGTCAAAGATAATAGCGGTAAAAAACAATCA
CTTGTATTTTACCATCTAAAATTAGATGTAGAGTTTGCATCTATCCTGGGATTAACTAAA
GATAAGTCGTTAATTCAAAATTGGACACCGGCAAATGATAACAAAGCTGCGAAAGAACTT
TTTAAATCCGCTAATGAGGGGATAGGCCCTTCAGGAGTTCACGAAGATTTCTGA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA0059 [new locus tag: SA_RS00440 ]
- symbol: SA0059
- description: hypothetical protein
- length: 597
- theoretical pI: 7.42234
- theoretical MW: 67037.3
- GRAVY: -0.436013
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- FIG01108399: hypothetical protein
- PFAM: P-loop_NTPase (CL0023) DUF927; Domain of unknown function (DUF927) (PF06048; HMM-score: 255.2)and 2 moreAAA_29; P-loop containing region of AAA domain (PF13555; HMM-score: 12.7)Thioredoxin (CL0172) GSHPx; Glutathione peroxidase (PF00255; HMM-score: 12.1)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helix: 1
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 0.83
- Signal peptide possibility: -1
- N-terminally Anchored Score: 1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.008101
- TAT(Tat/SPI): 0.00052
- LIPO(Sec/SPII): 0.002309
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MTQTNPSFNPSPRYKSKKGWYKDKPPKEKGGMPTEVEIAGPIVIENKFIDPKTNTEKVIITDEDQKEIVESSDILTTQKLPSLMKYGFSINEKYTKDLGYALQQMRNQLPISYLYEGVGILETPFGPIVSLSEIYTTKEFDNKSPSDAICDNAYDLTPKGTFDNWFNMYLKEVKGSLLLELAVVFGISALVTSFLKHKHETEFAGIIFSFTGQSSTGKSTAASLAVSVAGNPTKGNETLFRNWNATRNALEGYLSNNFGIPIVFDELSSATFRDTTGLLYSITEGQGRQRSNVHGEVKTPKNWGTSVISTSEHSIFNDSAQNDGLRVRTIEINEQFTTNATNADNIKKAVALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDDKSNTGNRMFKRYAVITTSAKILGRVLATDIDIAKIRDYFIDYHGHTISERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGLISLKDDHIEVKMIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTTKRSVKDNSGKKQSLVFYHLKLDVEFASILGLTKDKSLIQNWTPANDNKAAKELFKSANEGIGPSGVHEDF
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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