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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus COL
  • locus tag: SACOL_RS05040 [old locus tag: SACOL0985 ]
  • pan locus tag?: SAUPAN003124000
  • symbol: SACOL_RS05040
  • pan gene symbol?: —
  • synonym:
  • product: MAP domain-containing protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SACOL_RS05040 [old locus tag: SACOL0985 ]
  • symbol: SACOL_RS05040
  • product: MAP domain-containing protein
  • replicon: chromosome
  • strand: +
  • coordinates: 993585..994019
  • length: 435
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002951 (993585..994019) NCBI
  • BioCyc: SACOL_RS05040 BioCyc
  • MicrobesOnline: see SACOL0985

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    ATGAAATTAAAATCATTTATAACTGTAACTTTGGCACTGGGCATGATCGCAACGACTGGC
    GCTACTGTGGCAGGTAATGAGGTATCTGCAGCAGAAAAGGACAAACTACCGGCAACTCAA
    AAAGCTAAAGAAATGCAAAATGTTCCATATACAATTGCAGTAGATGGCATTATGGCTTTC
    AATCAATCTTACTTAAATTTACCAAAAGATAGCCAATTATCATATTTAGATTTAGGAAAT
    AAAGTTAAAGCTTTGTTATATGATGAACGCGGTGTAACACCTGAGAAGATTCGAAATGCA
    AAATCTGCCGTTTACACGATTACTTGGAAAGATGGTAGTAAAAAAGAAGTGGATCTTAAG
    AAAGATAGCTACACAGCAAACTTGTTTGATTCAAATTCAATTAAACAAATTGATATTAAT
    GTAAAAACTAAATAA
    60
    120
    180
    240
    300
    360
    420
    435

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SACOL_RS05040 [old locus tag: SACOL0985 ]
  • symbol: SACOL_RS05040
  • description: MAP domain-containing protein
  • length: 144
  • theoretical pI: 9.84615
  • theoretical MW: 15838.1
  • GRAVY: -0.342361

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SACOL0985
  • PFAM:
    Ant-toxin_C (CL0386) MAP; MAP domain (PF03642; HMM-score: 121.9)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 9.68
    • Cellwall Score: 0.17
    • Extracellular Score: 0.16
    • Internal Helix: 1
  • LocateP:
  • SignalP: Signal peptide SP(Sec/SPI) length 30 aa
    • SP(Sec/SPI): 0.973909
    • TAT(Tat/SPI): 0.003194
    • LIPO(Sec/SPII): 0.020514
    • Cleavage Site: CS pos: 30-31. VSA-AE. Pr: 0.7117
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MKLKSFITVTLALGMIATTGATVAGNEVSAAEKDKLPATQKAKEMQNVPYTIAVDGIMAFNQSYLNLPKDSQLSYLDLGNKVKALLYDERGVTPEKIRNAKSAVYTITWKDGSKKEVDLKKDSYTANLFDSNSIKQIDINVKTK

⊟Experimental data[edit | edit source]

  • experimentally validated: see SACOL0985
  • protein localization: see SACOL0985
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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