PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN001079000
• symbol^?: hptA
• synonym:
• description^?: lipoprotein

  descriptions from strain specific annotations:

  • lipoprotein
  • extracellular solute-binding protein
  • iron ABC transporter substrate-binding protein
  • iron compound ABC transporter, substrate-binding protein
  • iron compound ABC transporter iron compound-binding protein
  • putative iron compound A C transporter, iron compound-binding protein
  • iron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane/binding protein
  • periplasmic-iron-binding protein BitC
  • bacterial extracellular solute-binding family protein
  • extracellular solute-binding family protein
  • Ferric iron ABC transporter, iron-binding protein
  • iron (Fe3+) ABC transporter membrane/binding protein
  • iron(III)-binding protein
  • iron ABC transporter periplasmic protein
  • iron compound ABC transporter, iron compound-binding protein, putative
  • iron compound ABC transporter substrate-binding protein
  • periplasmic iron binding protein
  • putative lipoprotein
• strand^?: -
• coordinates^?: 1354423..1355391
• synteny block^?: BlockID0006010
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0203
N315:
SA0217
NCTC8325:
SAOUHSC_00186
Newman:
NWMN_0161
USA300_FPR3757:
SAUSA300_0219
04-02981:
SA2981_0225
08BA02176:
C248_0208
11819-97:
MS7_0210
6850:
RSAU_000169
71193:
ST398NM01_0234
ECT-R 2:
ECTR2_185
ED133:
SAOV_0162
ED98:
SAAV_0190
HO 5096 0412:
SAEMRSA15_01830
JH1:
SaurJH1_0215
JH9:
SaurJH9_0209
JKD6008:
SAA6008_00193
JKD6159:
SAA6159_00199
LGA251:
SARLGA251_01880
M013:
M013TW_0204
MRSA252:
SAR0216
MSHR1132:
SAMSHR1132_01900
MSSA476:
SAS0200
Mu3:
SAHV_0224
Mu50:
SAV0225
MW2:
MW0200
RF122:
SAB0163c
ST398:
SAPIG0234
T0131:
SAT0131_00211
TCH60:
HMPREF0772_10283
TW20:
SATW20_02250
USA300_TCH1516:
USA300HOU_0232
VC40:
SAVC_00860

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKSKIYILLLFLIFLSACANTRHSESDKNVLTVYSPYQSNLIRPILNEFEKQEHVKIEIK
  N315            MKSKIYILLLFLIFLSSCANTRHSESDKNVLTVYSPYQSNLIRPILNEFEKQEHVKIEIK
  NCTC8325        MKSKIYILLLFLIFLSACANTRHSESDKNVLTVYSPYQSNLIRPILNEFEKQEHVKIEIK
  Newman          MKSKIYILLLFLIFLSACANTRHSESDKNVLTVYSPYQSNLIRPILNEFEKQEHVKIEIK
  USA300_FPR3757  MKSKIYILLLFLIFLSACANTRHSESDKNVLTVYSPYQSNLIRPILNEFEKQEHVKIEIK
                  ****************:*******************************************
  
  COL             HGSTQVLLSNLHNEDFSERGDVFMGGVLSETIDHPEDFVPYQDTSVTQQLEDYRSNNKYV
  N315            HGSTQVLLSNLHNEDFSERGDVFMGGVLSETIDHPEDFVPYQDTSVTQQLEDYRSNNKYV
  NCTC8325        HGSTQVLLSNLHNEDFSERGDVFMGGVLSETIDHPEDFVPYQDTSVTQQLEDYRSNNKYV
  Newman          HGSTQVLLSNLHNEDFSERGDVFMGGVLSETIDHPEDFVPYQDTSVTQQLEDYRSNNKYV
  USA300_FPR3757  HGSTQVLLSNLHNEDFSERGDVFMGGVLSETIDHPEDFVPYQDTSVTQQLEDYRSNNKYV
                  ************************************************************
  
  COL             TSFLLMPTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHH
  N315            TSFLLMPTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHH
  NCTC8325        TSFLLMPTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHH
  Newman          TSFLLMPTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHH
  USA300_FPR3757  TSFLLMPTVIVVNSDLQGDIKIRGYQDLLQPILKGKIAYSNPNTTTTGYQHMRAIYSMHH
                  ************************************************************
  
  COL             RVSDVHQFQNHAMQLSKTSKVIEDVAKGKYYAGLSYEQDARTWKNKGYPVSIVYPIEGTM
  N315            RVSDVHQFQNHAMQLSKTSKVIEDVAKGKYYAGLSYEQDARTWKNKGYPVSIVYPIEGTM
  NCTC8325        RVSDVHQFQNHAMQLSKTSKVIEDVAKGKYYAGLSYEQDARTWKNKGYPVSIVYPIEGTM
  Newman          RVSDVHQFQNHAMQLSKTSKVIEDVAKGKYYAGLSYEQDARTWKNKGYPVSIVYPIEGTM
  USA300_FPR3757  RVSDVHQFQNHAMQLSKTSKVIEDVAKGKYYAGLSYEQDARTWKNKGYPVSIVYPIEGTM
                  ************************************************************
  
  COL             LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVAEFDAKSIRKDVSEQSDQSIENLKN
  N315            LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVAEFDAKSIRKDVSEQSDQSIENLKN
  NCTC8325        LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVAEFDAKSIRKDVSEQSDQSIENLKN
  Newman          LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVAEFDAKSIRKDVSEQSDQSIENLKN
  USA300_FPR3757  LNVDGIALVKNAHPHPKRKKLVQYLTSRSVQQRLVAEFDAKSIRKDVSEQSDQSIENLKN
                  ************************************************************
  
  COL             IPLIPKSKLPDIPHHKFLEMIQ
  N315            IPLIPKSKLPDIPHHKFLEMIQ
  NCTC8325        IPLIPKSKLPDIPHHKFLEMIQ
  Newman          IPLIPKSKLPDIPHHKFLEMIQ
  USA300_FPR3757  IPLIPKSKLPDIPHHKFLEMIQ
                  **********************