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⊟Summary[edit | edit source]
- pan ID?: SAUPAN001145000
- symbol?: —
- synonym:
- description?: PTS system, IIA component
- PTS system, IIA component
- PTS IIA component
- PTS system, IIA component, putative
- PTS family glucose/glucoside (glc) porter component IIABC
- PTS system, glucose subfamily, IIA component domain protein
- PTS system, N-acetylglucosamine-specific IIA component / PTS system, N-acetylglucosamine-specific IIB component / PTS system, N-acetylglucosamine-specific IIC component
- PTS system beta-glucoside-specific transporter subunit IIABC
- PTS system glucose-specific IIA component
- PTS system glucose subfamily transporter subunit IIA
- PTS system transporter subunit IIA
- PTS system transport protein
- PTS transporter
- PTS transport system protein
- putative PTS transport system protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1420554..1421398
- synteny block?: BlockID0006650
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0265
08BA02176:
C248_0254
11819-97:
MS7_0255 (ptbA)
6850:
RSAU_000212
71193:
ST398NM01_0279
ECT-R 2:
ECTR2_226 (ptbA)
ED133:
SAOV_0206
ED98:
SAAV_0233
HO 5096 0412:
SAEMRSA15_02250
JH1:
SaurJH1_0256
JH9:
SaurJH9_0250
JKD6008:
SAA6008_00240
JKD6159:
SAA6159_00243
LGA251:
SARLGA251_02300
M013:
M013TW_0246
MRSA252:
SAR0263
MSHR1132:
SAMSHR1132_02320
MSSA476:
SAS0242
Mu3:
SAHV_0264
Mu50:
SAV0265
MW2:
MW0241
RF122:
SAB0204
ST398:
SAPIG0279
T0131:
SAT0131_00259
TCH60:
HMPREF0772_10236
TW20:
SATW20_02680
USA300_TCH1516:
USA300HOU_0276
VC40:
SAVC_01065
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSNKYKEQAQDILTAVGGVENIVDATYDTKCITIHMQHTIPSTANEVKQIVDVTSVAEND
N315 MSNKYKEQAQDILTAVGGVENIVDATYDTKCITIHMQHTIPSTANEVKQIVDVTSVAEND
NCTC8325 MSNKYKEQAQDILTAVGGVENIVDATYDTKCITIHMQHTIPSTANEVKQIVDVTSVAEND
Newman MSNKYKEQAQDILTAVGGVENIVDATYDTKCITIHMQHTIPSTANEVKQIVDVTSVAEND
USA300_FPR3757 MSNKYKEQAQDILTAVGGVENIVDATYDTKCITIHMQHTIPSTANEVKQIVDVTSVAEND
************************************************************
COL TQLVIKLNGNVDEVYQQLQRLIKNANVEESENTDNINSQDTSYTPQVKVTTPILVKAPIA
N315 AQLVIKLNGNVDEVYQQLQRLIKNANVEESENTDNINSQDTSYTPQVKVTTPILVKAPIA
NCTC8325 TQLVIKLNGNVDEVYQQLQRLIKNANVEESENTDNINSQDTSYTPQVKVTTPILVKAPIA
Newman TQLVIKLNGNVDEVYQQLQRLIKNANVEESENTDNINSQDTSYTPQVKVTTPILVKAPIA
USA300_FPR3757 TQLVIKLNGNVDEVYQQLQRLIKNANVEESENTDNINSQDTSYTPQVKVTTPILVKAPIA
:***********************************************************
COL GRRILLKEVRDSIFREKMVGEGLAIKAHEESKVIAPFNGLISMIVPTKHAVGIQSEDGVD
N315 GRRILLKEVRDSIFREKMVGEGLAIKAHEESKVIAPFNGLISMIVPTKHAVGIQSEDGVD
NCTC8325 GRRILLKEVRDSIFREKMVGEGLAIKAHEESKVIAPFNGLISMIVPTKHAVGIQSEDGVD
Newman GRRILLKEVRDSIFREKMVGEGLAIKAHEESKVIAPFNGLISMIVPTKHAVGIQSEDGVD
USA300_FPR3757 GRRILLKEVRDSIFREKMVGEGLAIKAHEESKVIAPFNGLISMIVPTKHAVGIQSEDGVD
************************************************************
COL IVIHIGVNTVDLEGKGFKCFVKQNDHVEAGQTLLQFDQQYIQQQGYNADVIVVISNSADL
N315 IVIHIGVNTVDLEGKGFKCFVKQNDHVEAGQTLLQFDQQYIQQQGYNADVIVVISNSADL
NCTC8325 IVIHIGVNTVDLEGKGFKCFVKQNDHVEAGQTLLQFDQQYIQQQGYNADVIVVISNSADL
Newman IVIHIGVNTVDLEGKGFKCFVKQNDHVEAGQTLLQFDQQYIQQQGYNADVIVVISNSADL
USA300_FPR3757 IVIHIGLNTVDLEGKGFKCFVKQNDHVEAGQTLLQFDQQYIQQQGYNADVIVVISNSADL
******:*****************************************************
COL GKVELTMNEIITTEDVIFKIFKN
N315 GKVELTMNEIITTEDVIFKIFKN
NCTC8325 GKVELTMNEIITTEDVIFKIFKN
Newman GKVELTMNEIITTEDVIFKIFKN
USA300_FPR3757 GKVELTMNEIITTEDVIFKIFKN
***********************