PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002181000
• symbol^?: —
• synonym:
• description^?: DNA mismatch repair protein MutT

  descriptions from strain specific annotations:

  • DNA mismatch repair protein MutT
  • MutT/nudix family protein
  • MutT/nudix family protein, putative
  • MutT domain-containing protein
  • NUDIX domain-containing protein
  • NADH pyrophosphatase
  • NUDIX hydrolase
  • phosphohydrolase
• strand^?: +
• coordinates^?: 2685160..2685570
• synteny block^?: BlockID0014820
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0509
N315:
SA0425
NCTC8325:
SAOUHSC_00429
Newman:
NWMN_0431
USA300_FPR3757:
SAUSA300_0440
04-02981:
SA2981_0442
08BA02176:
C248_0516
11819-97:
MS7_0440
6850:
RSAU_000400
71193:
ST398NM01_0532
ECT-R 2:
ECTR2_400
ED133:
SAOV_0484
ED98:
SAAV_0409
HO 5096 0412:
SAEMRSA15_03920
JH1:
SaurJH1_0501
JH9:
SaurJH9_0488
JKD6008:
SAA6008_00470
JKD6159:
SAA6159_00416
LGA251:
SARLGA251_04000
M013:
M013TW_0431
MRSA252:
SAR0466
MSHR1132:
SAMSHR1132_04110
MSSA476:
SAS0424
Mu3:
SAHV_0464
Mu50:
SAV0467
MW2:
MW0421
RF122:
SAB0416
ST398:
SAPIG0532
T0131:
SAT0131_00507
TCH60:
HMPREF0772_10056
TW20:
SATW20_05350
USA300_TCH1516:
USA300HOU_0467
VC40:
SAVC_01920

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             ---MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTM
  N315            ---MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTM
  NCTC8325        ---MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTM
  Newman          MSKMIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTM
  USA300_FPR3757  ---MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEELNLTLTM
                     *********************************************************
  
  COL             DEIEYVGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITDIRWIDKDNDALIAPA
  N315            DEIEYIGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITDIRWIDKDNDALIAPA
  NCTC8325        DEIEYVGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITDIRWIDKDNDALIAPA
  Newman          DEIEYVGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITDIRWIDKDNDALIAPA
  USA300_FPR3757  DEIEYVGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEITDIRWIDKDNDALIAPA
                  *****:******************************************************
  
  COL             VKVWIETYGGKHDK
  N315            VKVWIETYGGKHDK
  NCTC8325        VKVWIETYGGKHDK
  Newman          VKVWIETYGGKHDK
  USA300_FPR3757  VKVWIETYGGKHDK
                  **************