Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN002183000
- symbol?: —
- synonym:
- description?: hypothetical protein, YibE/F-like protein
- hypothetical protein, YibE/F-like protein
- YibE/F family protein
- conserved multitransmembrane protein
- membrane spanning protein
- multitransmembrane protein
- yibE/F-like family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 2686244..2687026
- synteny block?: BlockID0014840
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0444
08BA02176:
C248_0518
11819-97:
MS7_0442
6850:
RSAU_000402
71193:
ST398NM01_0534
ECT-R 2:
ECTR2_402
ED133:
SAOV_0486c
ED98:
SAAV_0411
HO 5096 0412:
SAEMRSA15_03940
JH1:
SaurJH1_0503
JH9:
SaurJH9_0490
JKD6008:
SAA6008_00472
JKD6159:
SAA6159_00418
LGA251:
SARLGA251_04020
M013:
M013TW_0433
MRSA252:
SAR0468
MSHR1132:
SAMSHR1132_04130
MSSA476:
SAS0426
Mu3:
SAHV_0466
Mu50:
SAV0469
MW2:
MW0423
RF122:
SAB0418c
ST398:
SAPIG0534
T0131:
SAT0131_00509
TCH60:
HMPREF0772_10054
TW20:
SATW20_05370
USA300_TCH1516:
USA300HOU_0469
VC40:
SAVC_01930
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNAVFILALLLLFLMIIFGGKKGFISYLTLFLNFAILIISIVLIIFGVPIYVVTFFFCII
N315 MNAVFILALLLLFLMIIFGGKKGFISYLTLFLNFAILIISIVLIIFGVPIYVVTFFFCII
NCTC8325 MNAVFILALLLLFLMIIFGGKKGFISYLTLFLNFAILIISIVLIIFGVPIYVVTFFFCII
Newman MNAVFILALLLLFLMIIFGGKKGFISYLTLFLNFAILIISIVLIIFGVPIYVVTFFFCII
USA300_FPR3757 MNAVFILALLLLFLMIIFGGKKGFISYLTLFLNFAILIISIVLIIFGVPIYVVTFFFCII
************************************************************
COL IGACNLFVLNSYNVKTQAAFISTIVTTILLITLIYLSVYFGHLQGFSTEQQDETYVYSMN
N315 IGACNLFVLNSYNVKTQAAFISTIVTTILLITLIYLSVYFGHLQGFSTEQQDETYVYSMN
NCTC8325 IGACNLFVLNSYNVKTQAAFISTIVTTILLITLIYLSVYFGHLQGFSTEQQDETYVYSMN
Newman IGACNLFVLNSYNVKTQAAFISTIVTTILLITLIYLSVYFGHLQGFSTEQQDETYVYSMN
USA300_FPR3757 IGACNLFVLNSYNVKTQAAFISTIVTTILLITLIYLSVYFGHLQGFSTEQQDETYVYSMN
************************************************************
COL IGIDMVQFMVFTIILAVIAAVIDLTITISSPIYELHQVNPTLTQYELFQSGMRVGREILA
N315 IGIDMVQFMVFTIILAVIAAVIDLTITISSPIYELHQVNPTLTQYELFQSGMRVGREILA
NCTC8325 IGIDMVQFMVFTIILAVIAAVIDLTITISSPIYELHQVNPTLTQYELFQSGMRVGREILA
Newman IGIDMVQFMVFTIILAVIAAVIDLTITISSPIYELHQVNPTLTQYELFQSGMRVGREILA
USA300_FPR3757 IGIDMVQFMVFTIILAVIAAVIDLTITISSPIYELHQVNPTLTQYELFQSGMRVGREILA
************************************************************
COL TSANTIYLAFFGGQLALFIWFFKLKYSFGHIINSKIFAQEFISIILGGIAVAISIPITAW
N315 TSANTIYLAFFGGQLALFIWFFKLKYSFGHIINSKIFAQEFISIILGGIAVAISIPITAW
NCTC8325 TSANTIYLAFFGGQLALFIWFFKLKYSFGHIINSKIFAQEFISIILGGIAVAISIPITAW
Newman TSANTIYLAFFGGQLALFIWFFKLKYSFGHIINSKIFAQEFISIILGGIAVAISIPITAW
USA300_FPR3757 TSANTIYLAFFGGQLALFIWFFKLKYSFGHIINSKIFAQEFISIILGGIAVAISIPITAW
************************************************************
COL ITAFLIKRPSRQRKNDESIN
N315 ITAFLIKRPSRQRKNDESIN
NCTC8325 ITAFLIKRPSRQRKNDESIN
Newman ITAFLIKRPSRQRKNDESIN
USA300_FPR3757 ITAFLIKRPSRQRKNDESIN
********************