PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002438000
• symbol^?: hypR
• synonym:
• description^?: transcriptional regulator

  descriptions from strain specific annotations:

  • transcriptional regulator
  • DNA-binding protein, putative
  • Rrf2 family transcriptional regulator
  • AsnC family transcriptional regulator
  • BadM/Rrf2 family transcriptional regulator
  • probable DNA-binding protein
  • putative DNA-binding protein
  • putative Rrf2 family transcriptional regulator protein
  • Rrf2 family protein
  • transcriptional regulator family protein
• strand^?: -
• coordinates^?: 2957440..2957856
• synteny block^?: BlockID0016760
• occurrence^?: in 97% of 33 strains

⊟Orthologs

COL:
SACOL0641
N315:
SA0552
NCTC8325:
SAOUHSC_00582
Newman:
NWMN_0558
USA300_FPR3757:
SAUSA300_0577
04-02981:
SA2981_0572
08BA02176:
C248_0671
11819-97:
MS7_0646
6850:
RSAU_000547
71193:
ST398NM01_0669
ECT-R 2:
ECTR2_548
ED133:
SAOV_0629c
ED98:
SAAV_0558
HO 5096 0412:
SAEMRSA15_05230
JH1:
SaurJH1_0633
JH9:
SaurJH9_0618
JKD6008:
SAA6008_00602
JKD6159:
SAA6159_00548
LGA251:
SARLGA251_05300
M013:
—
MRSA252:
SAR0601
MSHR1132:
SAMSHR1132_05390
MSSA476:
SAS0554
Mu3:
SAHV_0593
Mu50:
SAV0595
MW2:
MW0550
RF122:
SAB0545c
ST398:
SAPIG0669
T0131:
SAT0131_00658
TCH60:
HMPREF0772_12593
TW20:
SATW20_06640
USA300_TCH1516:
USA300HOU_0588
VC40:
SAVC_02560

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNLEFNIAVHVLAFLTKHHSEKFNSSSLAELTCLNPVQLRRVTTQLVDLKMIDTIRGKDG
  N315            MNLEFNIAVHVLAFLTKHHSEKFNSSSLAELTCLNPVQLRRVTTQLVDLKMIDTIRGKDG
  NCTC8325        --------MHVLAFLTKHHSEKFNSSSLAELTCLNPVQLRRVTTQLVDLKMIDTIRGKDG
  Newman          MNLEFNIAVHVLAFLTKHHSEKFNSSSLAELTCLNPVQLRRVTTQLVDLKMIDTIRGKDG
  USA300_FPR3757  --------MHVLAFLTKHHSEKFNSSSLAELTCLNPVQLRRVTTQLVDLKMIDTIRGKDG
                          :***************************************************
  
  COL             GYLANDQSADVSLATLYKHFVLEKEHHTRLFTGDEGSHCQIARNIATTMSHYQQDEQNII
  N315            GYLANDQSADVSLATLYKHFVLEKEHHTRLFTGDEGSHCQIARNIATTMSHYQQDEQNII
  NCTC8325        GYLANDQSADVSLATLYKHFVLEKEHHTRLFTGDEGSHCQIARNIATTMSHYQQDEQNII
  Newman          GYLANDQSADVSLATLYKHFVLEKEHHTRLFTGDEGSHCQIARNIATTMSHYQQDEQNII
  USA300_FPR3757  GYLANDQSADVSLATLYKHFVLEKEHHTRLFTGDEGSHCQIARNIATTMSHYQQDEQNII
                  ************************************************************
  
  COL             INFYNGKTIKDVIEDIQKEDLCHENI
  N315            INFYNEKTIKDVIEDIQKEDLCHENI
  NCTC8325        INFYNGKTIKDVIEDIQKEDLCHENI
  Newman          INFYNGKTIKDVIEDIQKEDLCHENI
  USA300_FPR3757  INFYNGKTIKDVIEDIQKEDLCHENI
                  ***** ********************