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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003119000
- symbol?: —
- synonym:
- description?: dsRNA-binding YrdC-domain protein, putative
- dsRNA-binding YrdC-domain protein, putative
- L-threonylcarbamoyladenylate synthase
- Sua5/YciO/YrdC/YwlC family protein
- pseudogene
- SUA5/yciO/yrdC, N-terminal domain protein
- SUA5/yciO/yrdC domain-containing protein
- SUA5 protein
- Sua5 YciO YrdC YwlC family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3503067..3503708
- synteny block?: BlockID0022110
- occurrence?: in 82% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0933
08BA02176:
—
11819-97:
MS7_0933
6850:
RSAU_000854
71193:
—
ECT-R 2:
ECTR2_833
ED133:
SAOV_0924
ED98:
SAAV_0939
HO 5096 0412:
SAEMRSA15_08070
JH1:
SaurJH1_0996
JH9:
SaurJH9_0977
JKD6008:
SAA6008_00931
JKD6159:
—
LGA251:
SARLGA251_08950
M013:
M013TW_0898
MRSA252:
SAR0941
MSHR1132:
—
MSSA476:
SAS0848
Mu3:
SAHV_0973
Mu50:
SAV0978
MW2:
MW0860
RF122:
—
ST398:
—
T0131:
SAT0131_01011 (atpG)
TCH60:
HMPREF0772_12267
TW20:
SATW20_09770
USA300_TCH1516:
USA300HOU_0936
VC40:
SAVC_04060
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEILNDSVKSFEKLYLQLQDGFPVIVPTDTNYNLCSLPNNDLCIDKIFEYKKRSKDKPLS
N315 MEILNDSVKSFEKLYLQLQDGFPVIVPTDTNYNLCSLPNNDLCIDKIFEYKKRSKDKPLS
NCTC8325 MEILNDSVKSFEKLYLQLQDGFPVIVPTDTNYNLCSLPNNDLCIDKIFEYKKRSKDKPLS
Newman MEILNDSVKSFEKLYLQLQDGFPVIVPTDTNYNLCSLPNNDLCIDKIFEYKKRSKDKPLS
USA300_FPR3757 MEILNDSVKSFEKLYLQLQDGFPVIVPTDTNYNLCSLPNNDLCIDKIFEYKKRSKDKPLS
************************************************************
COL LFIDKPEDWKLYGDNQNTEIVDKLVEIFWPGPLNIILKNKTSYNYMLNNSDSIAIGCVQN
N315 LFIDKPEDWKLYGDNQNTEIVDKLVEIFWPGPLNIILKNKTSYNYMLNNSDSIAIGCVQN
NCTC8325 LFIDKPEDWKLYGDNQNTEIVDKLVEIFWPGPLNIILKNKTSYNYMLNNSDSIAIGCVQN
Newman LFIDKPEDWKLYGDNQNTEIVDKLVEIFWPGPLNIILKNKTSYNYMLNNSDSIAIGCVQN
USA300_FPR3757 LFIDKPEDWKLYGDNQNTEIVDKLVEIFWPGPLNIILKNKTSYNYMLNNSDSIAIGCVQN
************************************************************
COL KTMRRFISYINSPIAITSANISGTADDILITENEAIKHMGENVRYMLRSQNKTNYKTSST
N315 KTMRRFISYINSPIAITSANISGTADDILITENEAIKHMGENVRYMLRSQNKTNYKTSST
NCTC8325 KTMRRFISYINSPIAITSANISGTADDILITENEAIKHMGENVRYMLRSQNKTNYKTSST
Newman KTMRRFISYINSPIAITSANISGTADDILITENEAIKHMGENVRYMLRSQNKTNYKTSST
USA300_FPR3757 KTMRRFISYINSPIAITSANISGTADDILITENEAIKHMGENVRYMLRSQNKTNYKTSST
************************************************************
COL IIKVTDNKIELLREGDIKFEEIKERLGTGIIYE
N315 IIKVTDNKIELLREGDIKFEEIKERLGTGIIYE
NCTC8325 IIKVTDNKIELLREGDIKFEEIKERLGTGIIYE
Newman IIKVTDNKIELLREGDIKFEEIKERLGTGIIYE
USA300_FPR3757 IIKVTDNKIELLREGDIKFEEIKERLGTGIIYE
*********************************