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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003187000
- symbol?: —
- synonym:
- description?: alanine:cation symporter family protein
- alanine:cation symporter family protein
- sodium:alanine symporter family protein
- Na+/alanine symporter family protein
- sodium/proton-dependent alanine carrier protein
- AGCS family alanine or glycine:sodium (Na+) or proton (H+) symporter
- amino acid carrier family protein
- amino acid carrier protein
- amino-acid carrier protein alsT
- Sodium/alanine symporter
- sodium/alanine symporter family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3577965..3579593
- synteny block?: BlockID0022740
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0967
08BA02176:
C248_1037
11819-97:
MS7_0968
6850:
RSAU_000891
71193:
ST398NM01_1008
ECT-R 2:
ECTR2_867 (agcS)
ED133:
SAOV_0958
ED98:
SAAV_0975
HO 5096 0412:
SAEMRSA15_08430
JH1:
SaurJH1_1030
JH9:
SaurJH9_1011
JKD6008:
SAA6008_00967 (alsT)
JKD6159:
SAA6159_00869 (alsT)
LGA251:
SARLGA251_09280
M013:
M013TW_0935
MRSA252:
SAR0980
MSHR1132:
SAMSHR1132_08600
MSSA476:
SAS0882
Mu3:
SAHV_1007
Mu50:
SAV1013
MW2:
MW0894
RF122:
SAB0879
ST398:
SAPIG1008
T0131:
SAT0131_01047
TCH60:
HMPREF0772_12223
TW20:
SATW20_10100
USA300_TCH1516:
USA300HOU_0971
VC40:
SAVC_04230
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL --------------------MIEKLVTFLNEVVWSKPLVYGLLITGVLFTLRMRFFQVRH
N315 -----------------------------------------MLITGVLFTLRMRFFQVRH
NCTC8325 --------------------MIEKLVTFLNEVVWSKPLVYGLLITGVLFTLRMRFFQVRH
Newman MKCLVLNRIIFLCLNNRGNLMIEKLVTFLNEVVWSKPLVYGLLITGVLFTLRMRFFQVRH
USA300_FPR3757 --------------------MIEKLVTFLNEVVWSKPLVYGLLITGVLFTLRMRFFQVRH
:******************
COL FKEMIRLMFQGEKSPNGISSFQAIAMSLAGRVGTGNIVGVSTAIFIGGPGAVFWMWITAF
N315 FKEMIRLMFQGEKSPNGISSFQAIAMSLAGRVGTGNIVGVSTAIFIGGPGAVFWMWITAF
NCTC8325 FKEMIRLMFQGEKSPNGISSFQAIAMSLAGRVGTGNIVGVSTAIFIGGPGAVFWMWITAF
Newman FKEMIRLMFQGEKSPNGISSFQAIAMSLAGRVGTGNIVGVSTAIFIGGPGAVFWMWITAF
USA300_FPR3757 FKEMIRLMFQGEKSPNGISSFQAIAMSLAGRVGTGNIVGVSTAIFIGGPGAVFWMWITAF
************************************************************
COL LGASSAFIESTLGQIFKRVENNEYRGGPAYYIEYGIGGKFGKIYGIIFAIVTIISVGLLL
N315 LGASSAFIESTLGQIFKRVENNEYRGGPAYYIEYGIGGKFGKIYGIIFAIVTIISVGLLL
NCTC8325 LGASSAFIESTLGQIFKRVENNEYRGGPAYYIEYGIGGKFGKIYGIIFAIVTIISVGLLL
Newman LGASSAFIESTLGQIFKRVENNEYRGGPAYYIEYGIGGKFGKIYGIIFAIVTIISVGLLL
USA300_FPR3757 LGASSAFIESTLGQIFKRVENNEYRGGPAYYIEYGIGGKFGKIYGIIFAIVTIISVGLLL
************************************************************
COL PGVQSNAIASSMHNAIHVPQWLMGGIVVVILGLIIFGGVRSIANVATAVVPFMAIIYILM
N315 PGVQSNAIASSMHNAIHVPQWLMGAIVVVILGLIIFGGVRSIANVATAVVPFMAIIYILM
NCTC8325 PGVQSNAIASSMHNAIHVPQWLMGGIVVVILGLIIFGGVRIIANVATAVVPFMAIIYILM
Newman PGVQSNAIASSMHNAIHVPQWLMGGIVVVILGLIIFGGVRSIANVATAVVPFMAIIYILM
USA300_FPR3757 PGVQSNAIASSMHNAIHVPQWLMGGIVVVILGLIIFGGVRSIANVATAVVPFMAIIYILM
************************.*************** *******************
COL AVIIICINIQEVPALFALIFKSAFGLQSAFGGIVGAMIEIGVKRGLYSNEAGQGTGPHAA
N315 AVIIICINIQEVPALFALIFKSAFGLQSAFGGIVGAMIEIGVKRGLYSNEAGQGTGPHAA
NCTC8325 AVIIICINIQEVPALFALIFKSAFGLQSAFGGIVGAMIEIGVKRGLYSNEAGQGTGPHAA
Newman AVIIICINIQEVPALFALIFKSAFGLQSAFGGIVGAMIEIGVKRGLYSNEAGQGTGPHAA
USA300_FPR3757 AVIIICINIQEVPALFALIFKSAFGLQSAFGGIVGAMIEIGVKRGLYSNEAGQGTGPHAA
************************************************************
COL AAAEVSHPSKQGLVQAFSVYIDTLFVCTATALIILISGTYNVTDGTVNANGTPHLIKDGG
N315 AAAEVSHPSKQGLVQAFSVYIDTLFVCTATALIILISGTYNVTDGTVNANGTPHLIKDGG
NCTC8325 AAAEVSHPSKQGLVQAFSVYIDTLFVCTATALIILISGTYNVTDGTVNANGTPHLIKDGG
Newman AAAEVSHPSKQGLVQAFSVYIDTLFVCTATALIILISGTYNVTDGTVNANGTPHLIKDGG
USA300_FPR3757 AAAEVSHPSKQGLVQAFSVYIDTLFVCTATALIILISGTYNVTDGTVNANGTPHLIKDGG
************************************************************
COL IYVENATGKDYSGTAMYAQAGIDKAFHGSGYQFDPTFSGVGSYFIAFALFFFAFTTILSY
N315 IYVENATGKDYSGTAMYAQAGIDKAFHGSGYQFDPTFSGVGSYFIAFALFFFAFTTILSY
NCTC8325 IYVENATGKDYSGTAMYAQAGIDKAFHGSGYQFDPTFSGVGSYFIAFALFFFAFTTILSY
Newman IYVENATGKDYSGTAMYAQAGIDKAFHGSGYQFDPTFSGVGSYFIAFALFFFAFTTILSY
USA300_FPR3757 IYVENATGKDYSGTAMYAQAGIDKAFHGSGYQFDPTFSGVGSYFIAFALFFFAFTTILSY
************************************************************
COL YYITETNVAYLTRNQNNQVSSIFINIARVIILFATFYGAVKTADVAWAFGDLGVGLMAWL
N315 YYITETNVAYLTRNQNNQVSSIFINIARVIILFATFYGAVKTADVAWAFGDLGVGLMAWL
NCTC8325 YYITETNVAYLTRNQNNQVSSIFINIARVIILFATFYGAVKTADVAWAFGDLGVGLMAWL
Newman YYITETNVAYLTRNQNNQVSSIFINIARVIILFATFYGAVKTADVAWAFGDLGVGLMAWL
USA300_FPR3757 YYITETNVAYLTRNQNNQVSSIFINIARVIILFATFYGAVKTADVAWAFGDLGVGLMAWL
************************************************************
COL NIIAIWILHKPAVNALKDYEIQKKRLGNGYNAVYQPDPNKLPNAVFWLKTYPERLKQARA
N315 NIIAIWILHKPAVNALKDYEIQKKRLGNGYNAVYQPDPNKLPNAVFWLKTYPERLKQARA
NCTC8325 NIIAIWILHKPAVNALKDYEIQKKRLGNGYNAVYQPDPNKLPNAVFWLKTYPERLKQARA
Newman NIIAIWILHKPAVNALKDYEIQKKRLGNGYNAVYQPDPNKLPNAVFWLKTYPERLKQARA
USA300_FPR3757 NIIAIWILHKPAVNALKDYEIQKKRLGNGYNAVYQPDPNKLPNAVFWLKTYPERLKQARA
************************************************************
COL KK
N315 KK
NCTC8325 KK
Newman KK
USA300_FPR3757 KK
**