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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003264000
- symbol?: —
- synonym:
- description?: cell envelope-related transcriptional attenuator, putative
- cell envelope-related transcriptional attenuator, putative
- polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase
- Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily F2
- cell envelope-related function transcriptional attenuator common domain-containing protein
- cell envelope-related transcriptional attenuator domain family
- cell envelope transcriptional attenuator
- exported protein
- LytR family transcriptional regulator
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3639826..3641032
- synteny block?: BlockID0023480
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1010
08BA02176:
C248_1081
11819-97:
MS7_1013
6850:
RSAU_000943
71193:
ST398NM01_1053
ECT-R 2:
ECTR2_911
ED133:
SAOV_1002c
ED98:
SAAV_1020
HO 5096 0412:
SAEMRSA15_08870
JH1:
SaurJH1_1138
JH9:
SaurJH9_1115
JKD6008:
SAA6008_01011
JKD6159:
SAA6159_00912
LGA251:
SARLGA251_09700
M013:
M013TW_0987
MRSA252:
SAR1029
MSHR1132:
SAMSHR1132_09040
MSSA476:
SAS0991
Mu3:
SAHV_1048
Mu50:
SAV1056
MW2:
MW0939
RF122:
SAB0922c
ST398:
SAPIG1053
T0131:
SAT0131_01090 (nanE)
TCH60:
HMPREF0772_12178
TW20:
SATW20_10520
USA300_TCH1516:
USA300HOU_1000
VC40:
SAVC_04445
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQ
N315 MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQ
NCTC8325 MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQ
Newman MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQ
USA300_FPR3757 MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQ
************************************************************
COL PISILFLGIDDNDGRRKKGQDAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGY
N315 PISILFLGIDDNDGRRKKGQDAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGY
NCTC8325 PISILFLGIDDNDGRRKKGQDAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGY
Newman PISILFLGIDDNDGRRKKGQDAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGY
USA300_FPR3757 PISILFLGIDDNDGRRKKGQDAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGY
************************************************************
COL YDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFVEAVNELGGIYYDVPYDLNEP
N315 YDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFVEAVNELGGIYYDVPYDLNEP
NCTC8325 YDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFVEAVNELGGIYYDVPYDLNEP
Newman YDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFVEAVNELGGIYYDVPYDLNEP
USA300_FPR3757 YDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFVEAVNELGGIYYDVPYDLNEP
************************************************************
COL NTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVDSIDK
N315 NTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVDSIDK
NCTC8325 NTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVDSIDK
Newman NTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVDSIDK
USA300_FPR3757 NTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVDSIDK
************************************************************
COL LDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYHPSVESI
N315 LDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYHPSVESI
NCTC8325 LDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYHPSVESI
Newman LDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYHPSVESI
USA300_FPR3757 LDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYHPSVESI
************************************************************
COL QKYANLLRKDLELSPINDKNDFLDQRVINHYGSLIPLTPLDNSLLRKEQNDTTDKDKTSN
N315 QKYANLLRKDLELSPINDKNDFLDQRVINHYGSLIPLTPLDSSLLRKEQNDTTDKDKTSN
NCTC8325 QKYANLLRKDLELSPINDKNDFLDQRVINHYGSLIPLTPLDNSLLRKEQNDTTDKDKTSN
Newman QKYANLLRKDLELSPINDKNDFLDQRVINHYGSLIPLTPLDNSLLRKEQNDTTDKDKTSN
USA300_FPR3757 QKYANLLRKDLELSPINDKNDFLDQRVINHYGSLIPLTPLDNSLLRKEQNDTTDKDKTSN
*****************************************.******************
COL ENSDSTNNSDSSNQQQPATDQNSNQNQGGTQQAPQASNNQNGVVN
N315 ENNDSTNNSDSSNQQQPATDQNLNQNQGGTQQAPQASNNQNGVVN
NCTC8325 ENSDSTNNSDSSNQQQPATDQNSNQNQGGTQQAPQASNNQNGVVN
Newman ENSDSTNNSDSSNQQQPATDQNSNQNQGGTQQAPQASNNQNGVVN
USA300_FPR3757 ENSDSTNNSDSSNQQQPATDQNSNQNQGGTQQAPQASNNQNGVVN
**.******************* **********************