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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003316000
- symbol?: —
- synonym:
- description?: cell-wall-binding lipoprotein
- cell-wall-binding lipoprotein
- YkyA-like cell-wall-binding lipoprotein, putative
- Lipoprotein
- lipoprotein, putative
- putative cell-wall binding lipoprotein, YkyA
- putative lipoprotein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3683644..3684291
- synteny block?: BlockID0024000
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1049
08BA02176:
C248_1119
11819-97:
MS7_1049
6850:
RSAU_000977
71193:
ST398NM01_1089
ECT-R 2:
ECTR2_947
ED133:
SAOV_1036
ED98:
SAAV_1057
HO 5096 0412:
SAEMRSA15_09220
JH1:
SaurJH1_1174
JH9:
SaurJH9_1152
JKD6008:
SAA6008_01047
JKD6159:
SAA6159_00948
LGA251:
SARLGA251_10050
M013:
M013TW_1024
MRSA252:
SAR1066
MSHR1132:
SAMSHR1132_09390
MSSA476:
SAS1027
Mu3:
SAHV_1084
Mu50:
SAV1092
MW2:
MW0975
RF122:
SAB0958
ST398:
SAPIG1089
T0131:
SAT0131_01129
TCH60:
HMPREF0772_12140
TW20:
SATW20_10870
USA300_TCH1516:
USA300HOU_1035
VC40:
SAVC_04620
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKFGKTIAVVLASSVLLAGCTTDKKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKK
N315 MKFGKTIAVVLASSVLLAGCTTDKKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKK
NCTC8325 MKFGKTIAVVLASSVLLAGCTTDKKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKK
Newman MKFGKTIAVVLASSVLLAGCTTDKKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKK
USA300_FPR3757 MKFGKTIAVVLASSVLLAGCTTDKKEIKAYLKQVDKIKDDEEPIKTVGKKIAELDEKKKK
************************************************************
COL LTEDVNSKDTAVRGKAVKDLIKNADDRLKEFEKEEDAIKKSEQDFKKAKSHVDNIDNDVK
N315 LTEDVNSKDTAVRGKAVKDLIKNADDRLKEFEKEEDAIKKSEQDFKKAKSHVDNIDNDVK
NCTC8325 LTEDVNSKDTAVRGKAVKDLIKNADDRLKEFEKEEDAIKKSEQDFKKAKSHVDNIDNDVK
Newman LTEDVNSKDTAVRGKAVKDLIKNADDRLKEFEKEEDAIKKSEQDFKKAKSHVDNIDNDVK
USA300_FPR3757 LTEDVNSKDTAVRGKAVKDLIKNADDRLKEFEKEEDAIKKSEQDFKKAKSHVDNIDNDVK
************************************************************
COL RKEVKQLDDVLKEKYKLHSDYAKAYKKAVNSEKTLFKYLNQNDATQQGVNEKSKAIEQNY
N315 RKEVKQLDDVLKEKYKLHGEYAKAYKKAVNSEKTLFKYLNQNDATQQGVNEKSKAIEQNY
NCTC8325 RKEVKQLDDVLKEKYKLHSDYAKAYKKAVNSEKTLFKYLNQNDATQQGVNEKSKAIEQNY
Newman RKEVKQLDDVLKEKYKLHSDYAKAYKKAVNSEKTLFKYLNQNDATQQGVNEKSKAIEQNY
USA300_FPR3757 RKEVKQLDDVLKEKYKLHSDYAKAYKKAVNSEKTLFKYLNQNDATQQGVNEKSKAIEQNY
******************.:****************************************
COL KKLKEVSDKYTKVLNKVGKEKQDVDQFK
N315 KKLKEVSDKYTKVLNKVGKEKQDVDQFK
NCTC8325 KKLKEVSDKYTKVLNKVGKEKQDVDQFK
Newman KKLKEVSDKYTKVLNKVGKEKQDVDQFK
USA300_FPR3757 KKLKEVSDKYTKVLNKVGKEKQDVDQFK
****************************