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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003363000
- symbol?: isdE
- synonym:
- description?: heme uptake system protein IsdE
- heme uptake system protein IsdE
- heme ABC transporter substrate-binding protein IsdE
- heme-iron ABC transporter, substrate-binding lipoprotein IsdE
- iron compound ABC transporter
- iron compound ABC transporter iron compound-binding protein
- putative iron compound ABC transporter iron compound-binding protein
- heme ABC transporter, heme-binding protein IsdE
- Heme transporter IsdDEF, lipoprotein IsdE
- putative transport system extracellular bindinglipoprotein
- High-affinity heme uptake system protein isdE
- iron (Fe+3) ABC superfamily ATP binding cassette transporter, binding protein
- iron (Fe+3) ABC transporter binding protein
- iron transport lipoprotein SirF
- periplasmic binding family protein
- periplasmic binding protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3729035..3729913
- synteny block?: BlockID0024460
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1089 (isdE)
08BA02176:
C248_1159 (isdE)
11819-97:
MS7_1089 (isdE)
6850:
RSAU_001017 (isdE)
71193:
ST398NM01_1129
ECT-R 2:
ECTR2_987
ED133:
SAOV_1129 (isdE)
ED98:
SAAV_1099 (isdE)
HO 5096 0412:
SAEMRSA15_09620 (isdE)
JH1:
SaurJH1_1214
JH9:
SaurJH9_1192
JKD6008:
SAA6008_01087 (isdE)
JKD6159:
SAA6159_00987 (isdE)
LGA251:
SARLGA251_10450 (isdE)
M013:
M013TW_1066
MRSA252:
SAR1106 (isdE)
MSHR1132:
SAMSHR1132_09790
MSSA476:
SAS1067
Mu3:
SAHV_1124
Mu50:
SAV1133
MW2:
MW1015 (isdE)
RF122:
SAB0997 (isdE)
ST398:
SAPIG1129
T0131:
SAT0131_01172
TCH60:
HMPREF0772_12100 (isdE)
TW20:
SATW20_11270 (isdE)
USA300_TCH1516:
USA300HOU_1067 (isdE)
VC40:
SAVC_04825
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVGKPTS
N315 MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVGKPTS
NCTC8325 ----------MISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVGKPTS
Newman MRIIKYLTILVISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVGKPTS
USA300_FPR3757 ----------MISVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVGKPTS
:*************************************************
COL YKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD
N315 YKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD
NCTC8325 YKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD
Newman YKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD
USA300_FPR3757 YKTLPNRYKDVPEIGQPMEPNVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFD
************************************************************
COL SLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYL
N315 SLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYL
NCTC8325 SLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYL
Newman SLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYL
USA300_FPR3757 SLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYL
************************************************************
COL VATDKSYIGDLVKIAGGENVIKVKDRQYISSNTENLLNINPDIILRLPHGMPEEVKKMFQ
N315 VATDKSYIGDLVKIAGGENVIKVKDRQYISSNTENLLNINPDIILRLPHGMPEEVKKMFQ
NCTC8325 VATDKSYIGDLVKIAGGENVIKVKDRQYISSNTENLLNINPDIILRLPHGMPEEVKKMFQ
Newman VATDKSYIGDLVKIAGGENVIKVKDRQYISSNTENLLNINPDIILRLPHGMPEEVKKMFQ
USA300_FPR3757 VATDKSYIGDLVKIAGGENVIKVKDRQYISSNTENLLNINPDIILRLPHGMPEEVKKMFQ
************************************************************
COL KEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK
N315 KEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK
NCTC8325 KEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK
Newman KEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK
USA300_FPR3757 KEFKQNDIWKHFKAVKNNHVYDLEEVPFGITANVDADKAMTQLYDLFYKDKK
****************************************************