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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003428000
- symbol?: ssl14
- synonym:
- description?: staphylococcal superantigen-like protein 14
- staphylococcal superantigen-like protein 14
- superantigen-like protein
- superantigen-like protein SSL14
- exotoxin
- putative exotoxin
- staphylococcal/Streptococcal toxin, beta-grasp domain protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3777419..3780263
- synteny block?: BlockID0025090
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1124
08BA02176:
C248_1194
11819-97:
MS7_1123
6850:
RSAU_001048
71193:
ST398NM01_1162
ECT-R 2:
ECTR2_1022
ED133:
SAOV_1166c
ED98:
SAAV_1136
HO 5096 0412:
SAEMRSA15_09990
JH1:
SaurJH1_1251
JH9:
SaurJH9_1226
JKD6008:
SAA6008_01120
JKD6159:
SAA6159_01018
LGA251:
SARLGA251_10770
M013:
M013TW_1099
MRSA252:
SAR1141
MSHR1132:
SAMSHR1132_10090
MSSA476:
SAS1101
Mu3:
SAHV_1158
Mu50:
SAV1168
MW2:
MW1049
RF122:
SAB1032c
ST398:
SAPIG1162
T0131:
SAT0131_01212
TCH60:
HMPREF0772_12066
TW20:
SATW20_11600
USA300_TCH1516:
USA300HOU_1105
VC40:
SAVC_04990
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKNIMNKLVLSTALLLLETTSTQLPKTPISFSSEAKAYNISENETNINELIKYYTQPHF
N315 MKKNIMNKLVLSTALLLLGTTSTQLPKTPISFSSEAKAYNISENETNINELIKYYTQPHF
NCTC8325 MKKNIMNKLVLSTALLLLETTSTQLPKTPISFSSEAKAYNISENETNINELIKYYTQPHF
Newman MKKNIMNKLVLSTALLLLETTSTQLPKTPISFSSEAKAYNISENETNINELIKYYTQPHF
USA300_FPR3757 MKKNIMNKLVLSTALLLLETTSTQLPKTPISFSSEAKAYNISENETNINELIKYYTQPHF
****************** *****************************************
COL SLSGKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQLRNKYVDIFGTKDEDTVEG
N315 SLSGKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQLRNKYVDIFGTKDEDTVEG
NCTC8325 SLSGKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQLRNKYVDIFGTKDEDTVEG
Newman SLSGKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQLRNKYVDIFGTKDEDTVEG
USA300_FPR3757 SLSGKWLWQKPNGSIHATLQTWVWYSHIQVFGSESWGNINQLRNKYVDIFGTKDEDTVEG
************************************************************
COL YWTYDETFTGGVTPAATSSDKPYRLFLKYSDKQQTIIGGHEFYKGNKPVLTLKELDFRIR
N315 YWTYDETFTGGVTPAATSSDKPYRLFLKYSDKQQTIIGGHEFYKGNKPVLTLKELDFRIR
NCTC8325 YWTYDETFTGGVTPAATSSDKPYRLFLKYSDKQQTIIGGHEFYKGNKPVLTLKELDFRIR
Newman YWTYDETFTGGVTPAATSSDKPYRLFLKYSDKQQTIIGGHEFYKGNKPVLTLKELDFRIR
USA300_FPR3757 YWTYDETFTGGVTPAATSSDKPYRLFLKYSDKQQTIIGGHEFYKGNKPVLTLKELDFRIR
************************************************************
COL QTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKLTDTNRYVKNPRNAEIEVILEKS
N315 QTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKLTDTNRYVKNPKNAQIEVILEKS
NCTC8325 QTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKLTDTNRYVKNPRNAEIEVILEKS
Newman QTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKLTDTNRYVKNPRNAEIEVILEKS
USA300_FPR3757 QTLIKNKKLYNGEFNKGQIKITADGNNYTIDLSKKLKLTDTNRYVKNPRNAEIEVILEKS
************************************************:**:********
COL N
N315 N
NCTC8325 N
Newman N
USA300_FPR3757 N
*