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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003429000
- symbol?: argF
- synonym:
- description?: ornithine carbamoyltransferase
- strand?: +
- coordinates?: 3780701..3781711
- synteny block?: BlockID0025100
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1125 (argF)
08BA02176:
C248_1195 (otc)
11819-97:
MS7_1124
6850:
RSAU_001049 (arcB1)
71193:
ST398NM01_1163
ECT-R 2:
ECTR2_1023 (argF)
ED133:
SAOV_1167
ED98:
SAAV_1137 (arcB1)
HO 5096 0412:
SAEMRSA15_10000 (otc)
JH1:
SaurJH1_1252
JH9:
SaurJH9_1227
JKD6008:
SAA6008_01121 (argF)
JKD6159:
SAA6159_01019 (argF)
LGA251:
SARLGA251_10780 (otc)
M013:
M013TW_1100
MRSA252:
SAR1142 (otc)
MSHR1132:
SAMSHR1132_10100
MSSA476:
SAS1102
Mu3:
SAHV_1159 (argF)
Mu50:
SAV1169 (argF)
MW2:
MW1050 (argF)
RF122:
SAB1033
ST398:
SAPIG1163 (argF)
T0131:
SAT0131_01213 (rplF)
TCH60:
HMPREF0772_12065 (argF2)
TW20:
SATW20_11610 (otc)
USA300_TCH1516:
USA300HOU_1106 (arcB2)
VC40:
SAVC_04995
⊟Genome Viewer[edit | edit source]
COL | |
N315 | |
NCTC8325 | |
Newman | |
USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL ---MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDST
N315 ---MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDST
NCTC8325 ---MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDST
Newman MLLMKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDST
USA300_FPR3757 ---MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDST
*********************************************************
COL RTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETL
N315 RTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETL
NCTC8325 RTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETL
Newman RTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETL
USA300_FPR3757 RTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETL
************************************************************
COL AEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAA
N315 AEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAA
NCTC8325 AEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAA
Newman AEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAA
USA300_FPR3757 AEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAA
************************************************************
COL IMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMG
N315 IMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMG
NCTC8325 IMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMG
Newman IMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMG
USA300_FPR3757 IMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYTDVWVSMG
************************************************************
COL EPDEVWKERLELLKPYQVNKEIMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREM
N315 EPDEVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREM
NCTC8325 EPDEVWKERLELLKPYQVNKEIMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREM
Newman EPDEVWKERLELLKPYQVNKEIMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREM
USA300_FPR3757 EPDEVWKERLELLKPYQVNKEIMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREM
*********************:**************************************
COL EVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF
N315 EVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF
NCTC8325 EVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF
Newman EVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF
USA300_FPR3757 EVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF
************************************