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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003490000
- symbol?: rqcH
- synonym:
- description?: fibrinogen-binding protein A-like protein
- fibrinogen-binding protein A-like protein
- fibronectin/fibrinogen binding-like protein
- fibronectin-binding domain-containing protein
- putative fibronectin/fibrinogen binding protein
- putative protein with fibronectin/fibrinogen like domain
- Fibronectin/fibrinogen-binding protein
- fibrinogen binding protein
- fibronectin/fibrinogen binding-related protein
- fibronectin-binding A domain-containing protein
- fibronectin-binding A domain protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3829099..3830831
- synteny block?: BlockID0025690
- occurrence?: in 100% of 33 strains
Suggest description of "ribosome quality control proteolytic-tagging enzyme" to harmonize with PMID 31155236
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1166
08BA02176:
C248_1238
11819-97:
MS7_1166
6850:
RSAU_001090
71193:
ST398NM01_1206
ECT-R 2:
ECTR2_1064
ED133:
SAOV_1211c
ED98:
SAAV_1180
HO 5096 0412:
SAEMRSA15_10410
JH1:
SaurJH1_1292
JH9:
SaurJH9_1267
JKD6008:
SAA6008_01163 (fbpA)
JKD6159:
SAA6159_01061 (fbpA)
LGA251:
SARLGA251_11190
M013:
M013TW_1146
MRSA252:
SAR1184
MSHR1132:
SAMSHR1132_10490
MSSA476:
SAS1142
Mu3:
SAHV_1198
Mu50:
SAV1208
MW2:
MW1091
RF122:
SAB1072c
ST398:
SAPIG1206
T0131:
SAT0131_01257
TCH60:
HMPREF0772_12024 (fbe)
TW20:
SATW20_12020
USA300_TCH1516:
USA300HOU_1146 (fbpA)
VC40:
SAVC_05205
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAYDGLFTKKMVESLQFLTTGRVHKINQPDNDTILMVVRQNRQNHQLLLSIHPNFSRLQL
N315 MAYDGLFTKKMVESLQFLTTGRVHKINQPDNDTILMVVRQNRQNHQLLLSIHPNFSRLQL
NCTC8325 MAYDGLFTKKMVESLQFLTTGRVHKINQPDNDTILMVVRQNRQNHQLLLSIHPNFSRLQL
Newman MAYDGLFTKKMVESLQFLTTGRVHKINQPDNDTILMVVRQNRQNHQLLLSIHPNFSRLQL
USA300_FPR3757 MAYDGLFTKKMVESLQFLTTGRVHKINQPDNDTILMVVRQNRQNHQLLLSIHPNFSRLQL
************************************************************
COL TTKKYDNPFNPPMFARVFRKHLEGGIIESIKQIGNDRRIEIDIKSKDEIGDTIYRTVILE
N315 TTKKYDNPFNPPMFARVFRKHLEGGIIESIKQIGNDRRIEIDIKSKDEIGDTIYRTVILE
NCTC8325 TTKKYDNPFNPPMFARVFRKHLEGGIIESIKQIGNDRRIEIDIKSKDEIGDTIYRTVILE
Newman TTKKYDNPFNPPMFARVFRKHLEGGIIESIKQIGNDRRIEIDIKSKDEIGDTIYRTVILE
USA300_FPR3757 TTKKYDNPFNPPMFARVFRKHLEGGIIESIKQIGNDRRIEIDIKSKDEIGDTIYRTVILE
************************************************************
COL IMGKHSNLILVDENRKIIEGFKHLTPNTNHYRTVMPGFNYEAPPTQHKINPYDITGAEVL
N315 IMGKHSNLILVDENRKIIEGFKHLTPNTNHYRTVMPGFNYEAPPTQHKINPYDITGAEVL
NCTC8325 IMGKHSNLILVDENRKIIEGFKHLTPNTNHYRTVMPGFNYEAPPTQHKINPYDITGAEVL
Newman IMGKHSNLILVDENRKIIEGFKHLTPNTNHYRTVMPGFNYEAPPTQHKINPYDITGAEVL
USA300_FPR3757 IMGKHSNLILVDENRKIIEGFKHLTPNTNHYRTVMPGFNYEAPPTQHKINPYDITGAEVL
************************************************************
COL KYIDFNAGNIAKQLLNQFEGFSPLITNEIVSRRQFMTSSTLPEAFDEVMAETKLPPTPIF
N315 KYIDFNAGNIAKQLLNQFEGFSPLITNEIVSRRQFMTSSTLPEAFDEVMAETKLPPTPIF
NCTC8325 KYIDFNAGNIAKQLLNQFEGFSPLITNEIVSRRQFMTSSTLPEAFDEVMAETKLPPTPIF
Newman KYIDFNAGNIAKQLLNQFEGFSPLITNEIVSRRQFMTSSTLPEAFDEVMAETKLPPTPIF
USA300_FPR3757 KYIDFNAGNIAKQLLNQFEGFSPLITNEIVSRRQFITSSTLPEAFDEVMAETKLPPTPIF
***********************************:************************
COL HKNHETGKEDFYFIKLNQFNDDTVTYDSLNDLLDRFYDARGERERVKQRANDLVRFVQQQ
N315 HKNHETGKEDFYFIKLNQFNDDTVTYDSLNDLLDRFYDARGERERVKQRANDLVRFVQQQ
NCTC8325 HKNHETGKEDFYFIKLNQFNDDTVTYDSLNDLLDRFYDARGERERVKQRANDLVRFVQQQ
Newman HKNHETGKEDFYFIKLNQFNDDTVTYDSLNDLLDRFYDARGERERVKQRANDLVRFVQQQ
USA300_FPR3757 HKNHETGKEDFYFIKLNQFNDDTVTYDSLNDLLDRFYDARGERERVKQRANDLVRFVQQQ
************************************************************
COL LHKYQNKLAKLIEEYEQSKNKDTEQLYGELITANIYRIKQGDKEVTALNYYTNEEVVIPL
N315 LHKYQNKLAKLIEEYEQSKNKDTEQLYGELITANIYRIKQGDKEVTALNYYTNEEVVIPL
NCTC8325 LHKYQNKLAKLIEEYEQSKNKDTEQLYGELITANIYRIKQGDKEVTALNYYTNEEVVIPL
Newman LHKYQNKLAKLIEEYEQSKNKDTEQLYGELITANIYRIKQGDKEVTALNYYTNEEVVIPL
USA300_FPR3757 LYKYQNKLAKLIEEYEQSKNKDTEQLYGELITANIYRIKQGDKEVTALNYYTNEEVVIPL
*:**********************************************************
COL NPTKSPSANAQYYYKQYNRMKTRERELQHQIQLTKDNIDYFSTIEQQLHHISVHDIDEIR
N315 NPTKSPSANAQYYYKQYNRMKTRERELQHQIQLTKDNIDYFSTIEQQLHHISVHDIDEIR
NCTC8325 NPTKSPSANAQYYYKQYNRMKTRERELQHQIQLTKDNIDYFSTIEQQLHHISVHDIDEIR
Newman NPTKSPSANAQYYYKQYNRMKTRERELQHQIQLTKDNIDYFSTIEQQLHHISVHDIDEIR
USA300_FPR3757 NPTKSPSANAQYYYKQYNRMKTRERELQHQIQLTKDNIDYFSTIEQQLHHISVHDIDEIR
************************************************************
COL DELAEQGFMKQRKNQTKKKKAQIQLQHYVSTDGDDIYVGKNNKQNDYLTNKKAKKTHTWL
N315 DELAEQGFMKQRKNQTKKKKAQIQLQHYVSTDGDDIYVGKNNKQNDYLTNKKAKKTHTWL
NCTC8325 DELAEQGFMKQRKNQTKKKKAQIQLQHYVSTDGDDIYVGKNNKQNDYLTNKKAKKTHTWL
Newman DELAEQGFMKQRKNQTKKKKAQIQLQHYVSTDGDDIYVGKNNKQNDYLTNKKAKKTHTWL
USA300_FPR3757 DELAEQGFMKQRKNQTKKKKAQIQLQHYVSTDGDDIYVGKNNKQNDYLTNKKAKKTHTWL
************************************************************
COL HTKDIPGSHVVIFNDAPSDTTIKEAAMLAGYFSKAGNSGQIPVDYTLIKNVHKPSGAKPG
N315 HTKDIPGSHVVIFNDAPSDTTIKEAAMLAGYFSKAGNSGQIPVDYTLIKNVHKPSGAKPG
NCTC8325 HTKDIPGSHVVIFNDAPSDTTIKEAAMLAGYFSKAGNSGQIPVDYTLIKNVHKPSGAKPG
Newman HTKDIPGSHVVIFNDAPSDTTIKEAAMLAGYFSKAGNSGQIPVDYTLIKNVHKPSGAKPG
USA300_FPR3757 HTKDIPGSHVVIFNDAPSDTTIKEAAMLAGYFSKAGNSGQIPVDYTLIKNVHKPSGAKPG
************************************************************
COL FVTYDNQKTLYATPDYELIQKMKQS
N315 FVTYDNQKTLYATPDYELIQKMKQL
NCTC8325 FVTYDNQKTLYATPDYELIQKMKQS
Newman FVTYDNQKTLYATPDYELIQKMKQS
USA300_FPR3757 FVTYDNQKTLYATPDYELIQKMKQS
************************