PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004036000
• symbol^?: proC
• synonym:
• description^?: pyrroline-5-carboxylate reductase

  descriptions from strain specific annotations:

  • pyrroline-5-carboxylate reductase
  • pyrroline-5-carboxylate reductase, putative
  • putative pyrroline-5-carboxylate reductase
  • pyrrolidine-5-carboxylate reductase
• strand^?: +
• coordinates^?: 4324471..4325296
• synteny block^?: BlockID0030730
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL1546 (proC)
N315:
SA1334
NCTC8325:
SAOUHSC_01597
Newman:
NWMN_1410
USA300_FPR3757:
SAUSA300_1452 (proC)
04-02981:
SA2981_1460
08BA02176:
C248_1543
11819-97:
MS7_1520 (proC)
6850:
RSAU_001370 (proC)
71193:
ST398NM01_1569
ECT-R 2:
ECTR2_1354 (proC)
ED133:
SAOV_1505
ED98:
SAAV_1493 (proC)
HO 5096 0412:
SAEMRSA15_14250
JH1:
SaurJH1_1591
JH9:
SaurJH9_1560
JKD6008:
SAA6008_01472 (proC)
JKD6159:
SAA6159_01432 (proC)
LGA251:
SARLGA251_14110
M013:
M013TW_1517
MRSA252:
SAR1579
MSHR1132:
SAMSHR1132_13420
MSSA476:
SAS1443
Mu3:
SAHV_1491
Mu50:
SAV1503
MW2:
MW1457
RF122:
SAB1364
ST398:
SAPIG1569 (proC)
T0131:
SAT0131_01596
TCH60:
HMPREF0772_11638 (proC)
TW20:
SATW20_15010
USA300_TCH1516:
USA300HOU_1504
VC40:
SAVC_06765

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKLVFYGAGNMAQAIFTGIINSSNLDANDIYLTNKSNEQALKAFAEKLGVNYSYDDATLL
  N315            MKLVFYGAGNMAQAIFTGIINSSNLDANDIYLTNKSNEQALKAFAEKLGVNYSYDDATLL
  NCTC8325        ----------MAQAIFTGIINSSNLDANDIYLTNKSNEQALKAFAEKLGVNYSYDDATLL
  Newman          MKLVFYGAGNMAQAIFTGIINSSNLDANDIYLTNKSNEQALKAFAEKLGVNYSYDDATLL
  USA300_FPR3757  ----------MAQAIFTGIINSSNLDANDIYLTNKSNEQALKAFAEKLGVNYSYDDATLL
                            **************************************************
  
  COL             KDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPIDYIKQQLECQNPVARIMPN
  N315            KDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPIDYIKQQLECQNPVARIMPN
  NCTC8325        KDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPIDYIKQQLECQNPVARIMPN
  Newman          KDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPIDYIKQQLECQNPVARIMPN
  USA300_FPR3757  KDADYVFLGTKPHDFDALATRIKPHITKDNCFISIMAGIPIDYIKQQLECQNPVARIMPN
                  ************************************************************
  
  COL             TNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVSEDHLHQVTAITGSGPAFLYH
  N315            TNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVSEDHLHQVTAITGSGPAFLYH
  NCTC8325        TNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVSEDHLHQVTAITGSGPAFLYH
  Newman          TNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVSEDHLHQVTAITGSGPAFLYH
  USA300_FPR3757  TNAQVGHSVTGISFSNNFDPKSKDEINDLVKAFGSVIEVSEDHLHQVTAITGSGPAFLYH
                  ************************************************************
  
  COL             VFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSDLSMAQLRKNITSKGGTTQAGLD
  N315            VFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSDLSMAQLRKNITSKGGTTQAGLD
  NCTC8325        VFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSDLSMAQLRKNITSKGGTTQAGLD
  Newman          VFEQYVKAGTKLGLEKEQVEESIPNLIIGTSKMIETSELSMAQLKKKIPLKGVQNKPGLD
  USA300_FPR3757  VFEQYVKAGTKLGLEKEQVEESIRNLIIGTSKMIERSDLSMAQLRKNITSKGGTTQAGLD
                  *********************** *********** *:******:*:*. **  .:.***
  
  COL             TLSQYDLVSIFEDCLNAAVDRSIELSNIEDQ
  N315            TLSQYDLVSIFEDCLNAAVDRSIELSNVEDQ
  NCTC8325        TLSQYDLVSIFEDCLNAAVDRSIELSNIEDQ
  Newman          TLSQYDLVSIFEDCLNAAVDRSIELSNIEDQ
  USA300_FPR3757  TLSQYDLVSIFEDCLNAAVDRSIELSNIEDQ
                  ***************************:***