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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004388000
- symbol?: tyrS
- synonym:
- description?: tyrosyl-tRNA synthetase
- tyrosyl-tRNA synthetase
- tyrosine--tRNA ligase
- tyrosyl-tRNA synthetase, TyrS
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4627250..4628512
- synteny block?: BlockID0033920
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1687 (tyrS)
08BA02176:
C248_1771 (tyrS)
11819-97:
MS7_1735 (tyrS)
6850:
RSAU_001585 (tyrS)
71193:
ST398NM01_1781
ECT-R 2:
ECTR2_1569 (tyrS)
ED133:
SAOV_1715
ED98:
SAAV_1739 (tyrS)
HO 5096 0412:
SAEMRSA15_16370 (tyrS)
JH1:
SaurJH1_1819
JH9:
SaurJH9_1784
JKD6008:
SAA6008_01698 (tyrS)
JKD6159:
SAA6159_01652 (tyrS)
LGA251:
SARLGA251_16190 (tyrS)
M013:
M013TW_1743
MRSA252:
SAR1806 (tyrS)
MSHR1132:
SAMSHR1132_15790
MSSA476:
SAS1655
Mu3:
SAHV_1715 (tyrS)
Mu50:
SAV1729 (tyrS)
MW2:
MW1671 (tyrS)
RF122:
SAB1587c (tyrS)
ST398:
SAPIG1781 (tyrS)
T0131:
SAT0131_01832
TCH60:
HMPREF0772_11424 (tyrS)
TW20:
SATW20_17190 (tyrS)
USA300_TCH1516:
USA300HOU_1717 (tyrS)
VC40:
SAVC_07850
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF
N315 MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF
NCTC8325 MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF
Newman MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF
USA300_FPR3757 MTNVLIEDLKWRGLIYQQTDEQGIEDLLNKEQVTLYCGADPTADSLHIGHLLPFLTLRRF
************************************************************
COL QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQIHNIFEFGTDHGAV
N315 QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAV
NCTC8325 QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAV
Newman QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAV
USA300_FPR3757 QEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHNIFEFGTDHGAV
**********************************************:*************
COL LVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLEHGISYTEFTYTILQAIDFGH
N315 LVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLEHGISYTEFTYTILQAIDFGH
NCTC8325 LVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLEHGISYTEFTYTILQAIDFGH
Newman LVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLEHGISYTEFTYTILQAIDFGH
USA300_FPR3757 LVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSRLEHGISYTEFTYTILQAIDFGH
************************************************************
COL LNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAV
N315 LNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAV
NCTC8325 LNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAV
Newman LNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAV
USA300_FPR3757 LNRELNCKIQVGGSDQWGNITSGIELMRRMYGQTDAYGLTIPLVTKSDGKKFGKSESGAV
************************************************************
COL WLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLA
N315 WLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLA
NCTC8325 WLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLA
Newman WLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLA
USA300_FPR3757 WLDAEKTSPYEFYQFWINQSDEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLA
************************************************************
COL EEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTNIVEVLI
N315 EEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTNIVEVLI
NCTC8325 EEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTNIVEVLI
Newman EEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTNIVEVLI
USA300_FPR3757 EEVTKFIHGEDALNDAIRISQALFSGDLKSLSAKELKDGFKDVPQVTLSNDTTNIVEVLI
************************************************************
COL ETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRGKKKYFMVNYQ
N315 ETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRGKKKYFMVNYQ
NCTC8325 ETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRGKKKYFMVNYQ
Newman ETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRGKKKYFMVNYQ
USA300_FPR3757 ETGISPSKRQAREDVNNGAIYINGERQQDVNYALAPEDKIDGEFTIIRRGKKKYFMVNYQ
************************************************************