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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004476000
- symbol?: spdA
- synonym:
- description?: CPBP family intramembrane metalloprotease
- CPBP family intramembrane metalloprotease
- CAAX amino terminal protease family protein
- CPBP family intramembrane metalloprotease SdpA
- abortive infection protein
- caax amino protease family protein
- CAAX amino terminal protease family
- CAAX amino terminal protease self- immunity family protein
- membrane spanning protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4717312..4718547
- synteny block?: BlockID0034720
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1735
08BA02176:
C248_1825
11819-97:
MS7_1782
6850:
RSAU_001635
71193:
ST398NM01_1830
ECT-R 2:
ECTR2_1616
ED133:
SAOV_1764
ED98:
SAAV_1790
HO 5096 0412:
SAEMRSA15_16890
JH1:
SaurJH1_1867
JH9:
SaurJH9_1832
JKD6008:
SAA6008_01750
JKD6159:
SAA6159_01701
LGA251:
SARLGA251_16670
M013:
M013TW_1792
MRSA252:
SAR1862
MSHR1132:
SAMSHR1132_16270
MSSA476:
SAS1703
Mu3:
SAHV_1765
Mu50:
SAV1780
MW2:
MW1720
RF122:
SAB1638
ST398:
SAPIG1830
T0131:
SAT0131_01895
TCH60:
HMPREF0772_11374
TW20:
SATW20_17700
USA300_TCH1516:
USA300HOU_1769
VC40:
SAVC_08115
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MQKFKDFFYDDLSVTRGNYFLTLMAAFFITIILFIGIVVSEVHLLYSMLIVLVGLILLRL
N315 MQKFKDFFYDDLSVTRGNYFLTLMAAFFITIILFIGIVVSEVHLLYSMLIVLVGLILLRL
NCTC8325 MQKFKDFFYDDLSVTRGNYFLTLMAAFFITIILFIGIVVSEVHLLYSMLIVLVGLILLRL
Newman MQKFKDFFYDDLSVTRGNYFLTLMAAFFITIILFIGIVVSEVHLLYSMLIVLVGLILLRL
USA300_FPR3757 MQKFKDFFYDDLSVTRGNYFLTLMAAFFITIILFIGIVVSEVHLLYSMLIVLVGLILLRL
************************************************************
COL FKINLFSFKKLTLSQVIYIIGGALLIYGLDNLYLYFHDVPANEQQLEQAIRNTPFYISIF
N315 FKINLFSFKKLTLSQVIYIIGGALLIYGLDNLYLYFHDVPANELQLEQEIRNTPFYISIF
NCTC8325 FKINLFSFKKLTLSQVIYIIGGALLIYGLDNLYLYFHDVPANEQQLEQAIRNTPFYISIF
Newman FKINLFSFKKLTLSQVIYIIGGALLIYGLDNLYLYFHDVPANEQQLEQAIRNTPFYISIF
USA300_FPR3757 FKINLFSFKKLTLSQVIYIIGGALLIYGLDNLYLYFHDVPANEQQLEQAIRNTPFYISIF
******************************************* **** ***********
COL TVTIIPAIVEEIVFRGMIIRVIFRKHLFLGLIVSSLVFASLHESDTWIGYLPYLYSGLIF
N315 TVTIIPAIVEEIVFRGMIIRVIFRKHLFLGLLVSSLVFASLHESDTWIGYLPYLYSGLIF
NCTC8325 TVTIIPAIVEEIVFRGMIIRVIFRKHLFLGLIVSSLVFASLHESDTWIGYLPYLYSGLIF
Newman TVTIIPAIVEEIVFRGMIIRVIFRKHLFLGLIVSSLVFASLHESDTWIGYLPYLYSGLIF
USA300_FPR3757 TVTIIPAIVEEIVFRGMIIRVIFRKHLFLGLIVSSLVFASLHESDTWIGYLPYLYSGLIF
*******************************:****************************
COL GLIYIKTKRLEVVIFMHFLNNLLALLFIIWR
N315 GLIYIKTKRLEVVIFMHFLNNLLALLFIIWG
NCTC8325 GLIYIKTKRLEVVIFMHFLNNLLALLFIIWR
Newman GLIYIKTKRLEVVIFMHFLNNLLALLFIIWR
USA300_FPR3757 GLIYIKTKRLEVVIFMHFLNNLLALLFIIWR
******************************