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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004833000
- symbol?: rrl3
- synonym:
- description?: 23S ribosomal RNA
- strand?: -
- coordinates?: 5015128..5018051
- synteny block?: BlockID0037630
- occurrence?: in 97% of 33 strains
rrlC : 23S ribosomal RNA [1]
• A crystal structure is available : 6YEF
Staphylococcal 23S rRNA is modified by methylation at uridine(792) and at uridine(1966) by rlmCD, methylation and inversion at pseudouridine(1942) by rlmH and rluD, methylation at guanosine(2278) by rlmB, methylation at guanosine(2472) by rlmK, uridine reduction at dihydrouridine(2476), methylation at adenosine(2530) by rlmN, and methylation at guanosine(2601) by rlmQ.
⊟Orthologs[edit | edit source]
04-02981:
SA2981_rRNA09
08BA02176:
C248_1930
11819-97:
MS7_1892
6850:
RSAU_001745
71193:
ST398NM01_r061
ECT-R 2:
ECTR2_1730
ED133:
SAOV_1884c
ED98:
SAAV_1907a
HO 5096 0412:
SAEMRSA15_rRNA0012
JH1:
SaurJH1_R0064
JH9:
SaurJH9_R0064
JKD6008:
SAA6008_r09
JKD6159:
SAA6159_r09
LGA251:
SARLGA251_r10
M013:
M013TW_1891
MRSA252:
SARr009
MSHR1132:
SAMSHR1132_r08
MSSA476:
SASr012
Mu3:
SAHV_r0009
Mu50:
SAVrRNA09
MW2:
MWrRNA12
RF122:
SAB_r09
ST398:
—
T0131:
SAT0131_r011
TCH60:
HMPREF0772_r10015
TW20:
SATW20_r090
USA300_TCH1516:
USA300HOU_r0009 (rrl3)
VC40:
SAVC_r12615
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues:
- ↑ Alexander Golubev, Bulat Fatkhullin, Iskander Khusainov, Lasse Jenner, Azat Gabdulkhakov, Shamil Validov, Gulnara Yusupova, Marat Yusupov, Konstantin Usachev
Cryo-EM structure of the ribosome functional complex of the human pathogen Staphylococcus aureus at 3.2 Å resolution.
FEBS Lett: 2020, 594(21);3551-3567
[PubMed:32852796] [WorldCat.org] [DOI] (I p)Adrián González-López, Daniel S D Larsson, Ravi Kiran Koripella, Brett N Cain, Martin Garcia Chavez, Paul J Hergenrother, Suparna Sanyal, Maria Selmer
Structures of the Staphylococcus aureus ribosome inhibited by fusidic acid and fusidic acid cyclopentane.
Sci Rep: 2024, 14(1);14253
[PubMed:38902339] [WorldCat.org] [DOI] (I e)Roberto Bahena-Ceron, Chloé Teixeira, Jose R Jaramillo Ponce, Philippe Wolff, Florence Couzon, Pauline François, Bruno P Klaholz, François Vandenesch, Pascale Romby, Karen Moreau, Stefano Marzi
RlmQ: a newly discovered rRNA modification enzyme bridging RNA modification and virulence traits in Staphylococcus aureus.
RNA: 2024, 30(3);200-212
[PubMed:38164596] [WorldCat.org] [DOI] (I e)