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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005444000
- symbol?: czrB
- synonym:
- description?: cation efflux family protein
- cation efflux family protein
- cation transporter
- cation-efflux system membrane protein, putative
- CDF family zinc efflux transporter CzrB
- zinc transporter ZitB
- Zn(II) and Co(II) transmembrane diffusion facilitator
- cadmium, cobalt and zinc/H(+)-K(+) antiporter
- cation diffusion facilitator family transporter
- cation-efflux system membrane protein
- CDF family cation diffusion facilitator
- Cobalt-zinc-cadmium resistance protein
- zinc resistance protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5601720..5602712
- synteny block?: BlockID0042390
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2086 (czrB)
08BA02176:
C248_2161 (czrB)
11819-97:
MS7_2164 (czcD)
6850:
RSAU_001983 (czrB)
71193:
ST398NM01_2188
ECT-R 2:
ECTR2_2002
ED133:
SAOV_2185
ED98:
SAAV_2201
HO 5096 0412:
SAEMRSA15_20540 (czrB)
JH1:
SaurJH1_2220
JH9:
SaurJH9_2182
JKD6008:
SAA6008_02185 (czrB)
JKD6159:
SAA6159_02060 (czrB)
LGA251:
SARLGA251_19470 (czrB)
M013:
M013TW_2106
MRSA252:
SAR2234 (czrB)
MSHR1132:
SAMSHR1132_19690
MSSA476:
SAS2049
Mu3:
SAHV_2130 (czrB)
Mu50:
SAV2146 (czrB)
MW2:
MW2070 (czrB)
RF122:
SAB2030 (czrB)
ST398:
SAPIG2188
T0131:
SAT0131_02311
TCH60:
HMPREF0772_11044 (zitB)
TW20:
SATW20_22840 (czrB)
USA300_TCH1516:
USA300HOU_2135 (czrB)
VC40:
SAVC_09610
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDT
N315 MSHS-HHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDT
NCTC8325 MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDT
Newman MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDT
USA300_FPR3757 MSHSHHHHDHMHSHVTTNNKKVLFISFLIIGLYMFIEIIGGLLANSLALLSDGIHMFSDT
**** *******************************************************
COL FSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSE
N315 FSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSE
NCTC8325 FSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSE
Newman FSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSE
USA300_FPR3757 FSLGVALVAFIYAEKNATTTKTFGYKRFEVLAALFNGVTLFVISILIVFEAIKRFFVPSE
************************************************************
COL VQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILI
N315 VQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILI
NCTC8325 VQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILI
Newman VQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILI
USA300_FPR3757 VQSKEMLIISIIGLIVNIVVAFFMFKGGDTSHNLNMRGAFLHVIGDLLGSVGAITAAILI
************************************************************
COL WAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQS
N315 WAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQS
NCTC8325 WAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQS
Newman WAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQS
USA300_FPR3757 WAFGWTIADPIASILVSVIILKSAWGITKSSINILMEGTPSDVDIDEVITTIKKDSRIQS
************************************************************
COL VHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHK
N315 VHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHK
NCTC8325 VHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHK
Newman VHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHK
USA300_FPR3757 VHDCHVWTISNDMNALSCHVVVDHTLTMKECELLLENIEHDLLHLNIHHMTIQLETPNHK
************************************************************
COL HDESIICSGTHSHSHNHHAHHHAHVH
N315 HDESIICSGTHSHSHNHHAHHHAHVH
NCTC8325 HDESIICSGTHSHSHNHHAHHHAHVH
Newman HDESIICSGTHSHSHNHHAHHHAHVH
USA300_FPR3757 HDESIICSGTHSHSHNHHAHHHAHVH
**************************