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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005792000
- symbol?: spdB
- synonym:
- description?: CPBP family intramembrane metalloprotease
- CPBP family intramembrane metalloprotease
- abortive infection superfamily protein
- CPBP family intramembrane metalloprotease SdpB
- Protein of pXO2-46
- abortive infection protein
- CAAX amino terminal protease family protein
- CAAX amino terminal protease self- immunity family protein
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5879420..5880152
- synteny block?: BlockID0045370
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2252
08BA02176:
C248_2355
11819-97:
MS7_2330
6850:
RSAU_002151
71193:
ST398NM01_2364
ECT-R 2:
ECTR2_2172
ED133:
SAOV_2353c
ED98:
SAAV_2375
HO 5096 0412:
SAEMRSA15_22110
JH1:
SaurJH1_2380
JH9:
SaurJH9_2337
JKD6008:
SAA6008_02349
JKD6159:
SAA6159_02217
LGA251:
SARLGA251_20960
M013:
M013TW_2270
MRSA252:
SAR2397
MSHR1132:
SAMSHR1132_21380
MSSA476:
SAS2206
Mu3:
SAHV_2297
Mu50:
SAV2313
MW2:
MW2234
RF122:
SAB2190c
ST398:
SAPIG2364
T0131:
SAT0131_02494 (murI)
TCH60:
HMPREF0772_10882
TW20:
SATW20_24450
USA300_TCH1516:
USA300HOU_2296
VC40:
SAVC_10430
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MENEKKKYTFKDIAWRDLLIIPIIGVIFYALTIAAYIGPILFGYYEIDSNLIFVATITQA
N315 MENEKKKYTFKDIAWRDLLIIPIIGVIFYALTIAAYIGPILFGYYEIDSNLIFVATITQA
NCTC8325 MENEKKKYTFKDIAWRDLLIIPIIGVIFYALTIAAYIGPILFGYYEIDSNLIFVATITQA
Newman MENEKKKYTFKDIAWRDLLIIPIIGVIFYALTIAAYIGPILFGYYEIDSNLIFVATITQA
USA300_FPR3757 MENEKKKYTFKDIAWRDLLIIPIIGVIFYALTIAAYIGPILFGYYEIDSNLIFVATITQA
************************************************************
COL LAYTIGIGAFYLFHLKVMPSRLRAGFAYIKKYWLRLSITYIIALILIYTYEYMTQFLPKH
N315 LAYTIGIGAFYLFHLKVMPSRLRAGFAYIKKYWLRLSITYIIALILIYTYEYMTQFLPKH
NCTC8325 LAYTIGIGAFYLFHLKVMPSRLRAGFAYIKKYWLRLSITYIIALILIYTYEYMTQFLPKH
Newman LAYTIGIGAFYLFHLKVMPSRLRAGFAYIKKYWLRLSITYIIALILIYTYEYMTQFLPKH
USA300_FPR3757 LAYTIGIGAFYLFHLKVMPSRLRAGFAYIKKYWLRLSITYIIALILIYTYEYMTQFLPKH
************************************************************
COL LQYSETANELELNKMFEVPAFLPVAFLLIVIVGPIVEEIVFRHILIGELGKKFNFIAMSI
N315 LQYSETANELELNKMFEVPAFLPVAFLLIVIVGPIVEEIVFRHILIGELGKKFNFIAMSI
NCTC8325 LQYSETANELELNKMFEVPAFLPVAFLLIVIVGPIVEEIVFRHILIGELGKKFNFIAMSI
Newman LQYSETANELELNKMFEVPAFLPVAFLLIVIVGPIVEEIVFRHILIGELGKKFNFIAMSI
USA300_FPR3757 LQYSETANELELNKMFEVPAFLPVAFLLIVIVGPIVEEIVFRHILIGELGKKFNFIAMSI
************************************************************
COL VSVFLFAFIHVTDAKSPFEFGPYLILSIILVFTYLKSGRNLGSTIALHIANNFVSFVISV
N315 VSVFLFAFIHVTDAKSPFEFGPYLILSIILVFTYLKSGRNLGSTIALHIANNFVSFVISV
NCTC8325 VSVFLFAFIHVTDAKSPFEFGPYLILSIILVFTYLKSGRNLGSTIALHIANNFVSFVISV
Newman VSVFLFAFIHVTDAKSPFEFGPYLILSIILVFTYLKSGRNLGSTIALHIANNFVSFVISV
USA300_FPR3757 VSVFLFAFIHVTDAKSPFEFGPYLILSIILVFTYLKSGRNLGSTIALHIANNFVSFVISV
************************************************************
COL ISIYA
N315 ISIYA
NCTC8325 ISIYA
Newman ISIYA
USA300_FPR3757 ISIYA
*****