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Summary[edit | edit source]

  • pan ID?: SAUPAN005797000
  • symbol?:
  • synonym:
  • description?: membrane protein
  • strand?: +
  • coordinates?: 5885394..5885750
  • synteny block?: BlockID0045420
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_2256
    08BA02176:
    C248_2359
    11819-97:
    MS7_2334
    6850:
    RSAU_002154
    71193:
    ST398NM01_2368
    ECT-R 2:
    ECTR2_2176
    ED133:
    SAOV_2357
    ED98:
    SAAV_2379
    HO 5096 0412:
    SAEMRSA15_22150
    JH1:
    SaurJH1_2384
    JH9:
    SaurJH9_2341
    JKD6008:
    SAA6008_02353
    JKD6159:
    SAA6159_02221
    LGA251:
    SARLGA251_21000
    M013:
    M013TW_2274
    MRSA252:
    SAR2401
    MSHR1132:
    SAMSHR1132_21420
    MSSA476:
    SAS2210
    Mu3:
    SAHV_2301
    Mu50:
    SAV2317
    MW2:
    MW2238
    RF122:
    SAB2194
    ST398:
    SAPIG2368
    T0131:
    SAT0131_02499
    TCH60:
    HMPREF0772_10878
    TW20:
    SATW20_24490
    USA300_TCH1516:
    USA300HOU_2300
    VC40:
    SAVC_10450

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MLKQILLRATKISVLFAVAFFIINYIGMEKPDILYLVGRTIIATLAFILICLTVFTIINS
    N315            MLKQILPRATKISILFAVAFFIINYIGMEKPDILYLVGRTIIATLAFILICLTLFTIINS
    NCTC8325        MLKQILLRATKISVLFAVAFFIINYIGMEKPDILYLVGRTIIATLAFILICLTVFTIINS
    Newman          MLKQILLRATKISVLFAVAFFIINYIGMEKPDILYLVGRTIIATLAFILICLTVFTIINS
    USA300_FPR3757  MLKQILLRATKISVLFAVAFFIINYIGMEKPDILYLVGRTIIATLAFILICLTVFTIINS
                    ****** ******:***************************************:******

    COL             PERKIKLGTTLPIALIIGIIFGAIFLTVQIGVITGLIIGVIATFIWELIEKNKGGRSS
    N315            PERKIKLGTTLPIALIIGIIFGAIFLTVQIGVITGLIIGVIATFIWELIEKNKGGRSS
    NCTC8325        PERKIKLGTTLPIALIIGIIFGAIFLTVQIGVITGLIIGVIATFIWELIEKNKGGRSS
    Newman          PERKIKLGTTLPIALIIGIIFGAIFLTVQIGVITGLIIGVIATFIWELIEKNKGGRSS
    USA300_FPR3757  PERKIKLGTTLPIALIIGIIFGAIFLTVQIGVITGLIIGVIATFIWELIEKNKGGRSS
                    **********************************************************