Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN006022000
- symbol?: cntE
- synonym:
- description?: MFS transporter
- MFS transporter
- major facilitator superfamily transporter, putative
- putative transporter
- transporter
- antibiotic resistance protein
- antibiotic resistance transport protein
- Bicyclomycin resistance protein
- Major facilitator superfamily MFS_1
- major facilitator superfamily protein
- major facilitator transporter
- MFS family major facilitator transporter
- putative transport protein
- transporter, putative
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6078629..6079822
- synteny block?: BlockID0047660
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2399
08BA02176:
C248_2512
11819-97:
MS7_2475
6850:
RSAU_002300
71193:
ST398NM01_2512
ECT-R 2:
ECTR2_2319
ED133:
SAOV_2512c
ED98:
SAAV_2528
HO 5096 0412:
SAEMRSA15_23600
JH1:
SaurJH1_2538
JH9:
SaurJH9_2489
JKD6008:
SAA6008_02503
JKD6159:
SAA6159_02359
LGA251:
SARLGA251_22420
M013:
M013TW_2422
MRSA252:
SAR2549
MSHR1132:
SAMSHR1132_22870
MSSA476:
SAS2353
Mu3:
SAHV_2446
Mu50:
SAV2462
MW2:
MW2386
RF122:
SAB2345c
ST398:
SAPIG2512
T0131:
SAT0131_02661
TCH60:
HMPREF0772_10727
TW20:
SATW20_25900
USA300_TCH1516:
USA300HOU_2453
VC40:
SAVC_11180
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKGAMAWPFLRLYILTLMFFSANAILNVFIPLRGHDLGATNTVIGIVMGAYMLTAMVFRP
N315 MKGAMAWPFLRLYILTLMFFSANAILNVFIPLRGHDLGATNTVIGIVMGAYMLTAMVFRP
NCTC8325 MKGAMAWPFLRLYILTLMFFSANAILNVFIPLRGHDLGATNTVIGIVMGAYMLTAMVFRP
Newman MKGAMAWPFLRLYILTLMFFSANAILNVFIPLRGHDLGATNTVIGIVMGAYMLTAMVFRP
USA300_FPR3757 MKGAMAWPFLRLYILTLMFFSANAILNVFIPLRGHDLGATNTVIGIVMGAYMLTAMVFRP
************************************************************
COL WAGQIIARVGPIKVLRFILIINAIALIIYGFTGLEGYFVARVMQGVCTAFFSMSLQLGII
N315 WAGQIIARVGPIKVLRIILIINAIALIIYGFTGLEGYFVARVMQGVCTAFFSMSLQLGII
NCTC8325 WAGQIIARVGPIKVLRIILIINAIALIIYGFTGLEGYFVARVMQGVCTAFFSMSLQLGII
Newman WAGQIIARVGPIKVLRIILIINAIALIIYGFTGLEGYFVARVMQGVCTAFFSMSLQLGII
USA300_FPR3757 WAGQIIARVGPIKVLRIILIINAIALIIYGFTGLEGYFVARVMQGVCTAFFSMSLQLGII
****************:*******************************************
COL DALPEEHRSEGVSLYSLFSTIPNLIGPLVAVGIWNANNISLFAIVIIFIALTTTFFGYRV
N315 DALPEEHRSEGVSLYSLFSTIPNLIGPLVAVGIWNANNISLFAIVIIFIALTTTFFGYRV
NCTC8325 DALPEEHRSEGVSLYSLFSTIPNLIGPLVAVGIWNANNISLFAIVIIFIALTTTFFGYRV
Newman DALPEEHRSEGVSLYSLFSTIPNLIGPLVAVGIWNANNISLFAIVIIFIALTTTFFGYRV
USA300_FPR3757 DALPEEHRSEGVSLYSLFSTIPNLIGPLVAVGIWNANNISLFAIVIIFIALTTTFFGYRV
************************************************************
COL TFAEQEPDTSDKIEKMPFNAVTVFAQFFKNKELLNSGIIMIVASIVFGAVSTFVPLYTVS
N315 TFAEQEPDTSDKIEKMPFNAVTVFAQFFKNKELLNSGIIMIVASIVFGAVSTFVPLYTVS
NCTC8325 TFAEQEPDTSDKIEKMPFNAVTVFAQFFKNKELLNSGIIMIVASIVFGAVSTFVPLYTVS
Newman TFAEQEPDTSDKIEKMPFNAVTVFAQFFKNKELLNSGIIMIVASIVFGAVSTFVPLYTVS
USA300_FPR3757 TFAEQEPDTSDKIEKMPFNAVTVFAQFFKNKELLNSGIIMIVASIVFGAVSTFVPLYTVS
************************************************************
COL LGFANAGIFLTIQAIAVVAARFYLRKYIPSDGMWHPKYMVSVLSLLVIASFVVAFGPQVG
N315 LGFANAGIFLTIQAIAVVAARFYLRKYIPSDGMWHPKYMVSVLSLLVIASFVVAFGPQVG
NCTC8325 LGFANAGIFLTIQAIAVVAARFYLRKYIPSDGMWHPKYMVSVLSLLVIASFVVAFGPQVG
Newman LGFANAGIFLTIQAIAVVAARFYLRKYIPSDGMWHPKYMVSVLSLLVIASFVVAFGPQVG
USA300_FPR3757 LGFANAGIFLTIQAIAVVAARFYLRKYIPSDGMWHPKYMVSVLSLLVIASFVVAFGPQVG
************************************************************
COL AIIFYGSAILIGMTQAMVYPTLTSYLSFVLPKVGRNMLLGLFIACADLGISLGGALMGPI
N315 AIIFYGSAILIGMTQAMVYPTLTSYLSFVLPKVGRNMLLGLFIACADLGISLGGALMGPI
NCTC8325 AIIFYGSAILIGMTQAMVYPTLTSYLSFVLPKVGRNMLLGLFIACADLGISLGGALMGPI
Newman AIIFYGSAILIGMTQAMVYPTLTSYLSFVLPKVGRNMLLGLFIACADLGISLGGALMGPI
USA300_FPR3757 AIIFYGSAILIGMTQAMVYPTLTSYLSFVLPKVGRNMLLGLFIACADLGISLGGALMGPI
************************************************************
COL SDLVGFKWMYLICGMLVIVIMIMSFLKKPTPRPASSL
N315 SDLVGFKWMYLICGMLVIVIMIMSFLKKPTPRPASSL
NCTC8325 SDLVGFKWMYLICGMLVIVIMIMSFLKKPTPRPASSL
Newman SDLVGFKWMYLICGMLVIVIMIMSFLKKPTPRPASSL
USA300_FPR3757 SDLVGFKWMYLICGMLVIVIMIMSFLKKPTPRPASSL
*************************************