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PangenomeCOLN315NCTC8325NewmanUSA300_FPR3757JSNZ04-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

Summary[edit | edit source]

  • pan ID?: SAUPAN006108000
  • symbol?: sasG
  • synonym:
  • description?: accumulation-associated protein

      descriptions from strain specific annotations:

    • accumulation-associated protein
    • cell wall surface anchor family protein
    • E domain-containing protein
    • putative cell wall surface anchor family protein
    • cell wall anchor domain-containing protein
    • LPXTG-motif cell wall anchor domain-containing protein
    • LPXTG-motif protein
  • strand?: -
  • coordinates?: 6158648..6188925
  • synteny block?: BlockID0048430
  • occurrence?: in 35% of 34 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    JSNZ:
    04-02981:
    08BA02176:
    11819-97:
    6850:
    71193:
    ECT-R 2:
    ECTR2_2350
    ED133:
    ED98:
    SAAV_2562
    HO 5096 0412:
    JH1:
    SaurJH1_2573
    JH9:
    SaurJH9_2521
    JKD6008:
    JKD6159:
    LGA251:
    M013:
    MRSA252:
    MSHR1132:
    MSSA476:
    Mu3:
    SAHV_2481
    Mu50:
    MW2:
    RF122:
    ST398:
    T0131:
    TCH60:
    TW20:
    USA300_TCH1516:
    VC40:
    SAVC_11355

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757
JSNZ

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.505)


    COL             --MRDKKGPVNKRVDFLSNKLNKYSIRKFTVGTASILIGSLMYLGTQQEAEAAENNIENP
    N315            --MRDKKGPVNKRVDFLSNKLNKYSIRKFTVGTASILIGSLMYLGTQQEAEAAENNIENP
    NCTC8325        --MRDKKGPVNKRVDFLSNKLNKYSIRKFTVGTASILIGSLMYLGTQQEAEAAENNIENP
    Newman          MQMRDKKGPVNKRVDFLSNKLNKYSIRKFTVGTASILIGSLMYLGTQQEAEAAENNIENP
    USA300_FPR3757  --MRDKKGPVNKRVDFLSNKLNKYSIRKFTVGTASILIGSLMYLGTQQEAEAAENNIENP
    JSNZ            --MRDKKGPVNKRVDFLSNKLNKYSIRKFTVGTASILIGSLMYLGTQQEAEAAENNIENP
                      **********************************************************

    COL             TTLKDNVQSKEVKIEEVTNKDTAPQGVEAKSEVTSNKDTIEHEPSVKAEDISKKEDTPKE
    N315            TTLKDNVQSKEVKIEEVTNKDTAPQGVEAKSEVTSNKDTIEHEASVKAEDISKKEDTPKE
    NCTC8325        TTLKDNVQSKEVKIEEVTNKDTAPQGVEAKSEVTSNKDTIEHEPSVKAEDISKKEDTPKE
    Newman          TTLKDNVQSKEVKIEEVTNKDTAPQGVEAKSEVTSNKDTIEHEPSVKAEDISKKEDTPKE
    USA300_FPR3757  TTLKDNVQSKEVKIEEVTNKDTAPQGVEAKSEVTSNKDTIEHEPSVKAEDISKKEDTPKE
    JSNZ            TTLKDNVQSKEVKIEEVTNKDTAPQGVEAKSEVTSNKDTIEHEPSVKAEDISKKEDTPKE
                    *******************************************.****************

    COL             VADVAEVQPKSSVTHNAETPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYG
    N315            VANVAEVQPKSSVTHNAEAPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYG
    NCTC8325        VADVAEVQPKSSVTHNAETPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYG
    Newman          VADVAEVQPKSSVTHNAETPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYG
    USA300_FPR3757  VADVAEVQPKSSVTHNAETPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYG
    JSNZ            VADVAEVQPKSSVTHNAETPKVRKARSVDEGSFDITRDSKNVVESTPITIQGKEHFEGYG
                    **:***************:*****************************************

    COL             SVDIQKKPTDLGVSEVTRFNVGN-ESNGLIGALQLKNKIDFSKDFNFKVRVANNHQSNTT
    N315            SVDIQKNPTDLGVSEVTRFNVGN-ESNGLIGALQLKNKIDFSKDFNFKVRVANNHQSNTT
    NCTC8325        SVDIQKKPTDLGVSEVTRFNVGN-ESNGLIGALQLKNKIDFSKDFNFKVRVANNHQSNTT
    Newman          SVDIQKKPTDLGVSEVTRFNVGN-ESNGLIGALQLKNKIDFSKDFNFKVRVANNHQSNTT
    USA300_FPR3757  SVDIQKKPTDLGVSEVTRFNVGN-ESNGLIGALQLKNKIDFSKDFNFKVRVANNHQSNTT
    JSNZ            SVDIQSNPEDLKVSEVTRFNKKSIGKNELTGALQLKNKVSFKNDFEFNIRVANNHQSVTT
                    *****.:* ** ********  .  .* * ********:.*.:**:*::******** **

    COL             GADGWGFLFSKGNAEEYLTNGGILGDKGLVNSGGFKIDTGYIYTSSMDKTEKQAGQGYRG
    N315            GADGWGFLFSKGNAEEYLTNGGILGDKGLVNSGGFKIDTGYIYTSSMDKTEKQAGQGYRG
    NCTC8325        GADGWGFLFSKGNAEEYLTNGGILGDKGLVNSGGFKIDTGYIYTSSMDKTEKQAGQGYRG
    Newman          GADGWGFLFSKGNAEEYLTNGGILGDKGLVNSGGFKIDTGYIYTSSMDKTEKQAGQGYRG
    USA300_FPR3757  GADGWGFLFSKGNAEEYLTNGGILGDKGLVNSGGFKIDTGYIYTSSMDKTEKQAGQGYRG
    JSNZ            GADGWGFLFSKGDGNEYLQKGGILGPKGMENSAGFKIDTGYNFKDPMDKEEKQAGQGFKG
                    ************:.:*** :***** **: **.******** :...*** *******::*

    COL             YGAFVKNDSSGNSQMVGENIDK--SKTNFLNYADNSTNTSDGKFHGQRLNDVILTYVAST
    N315            YGAFVKNDSSGNSQMVGENIDK--SKTNFLNYADNSTNTSDGKFHGQRLNDVILTYVAST
    NCTC8325        YGAFVKNDSSGNSQMVGENIDK--SKTNFLNYADNSTNTSDGKFHGQRLNDVILTYVAST
    Newman          YGAFVKNDSSGNSQMVGENIDK--SKTNFLNYADNSTNTSDGKFHGQRLNDVILTYVAST
    USA300_FPR3757  YGAFVKNDSSGNSQMVGENIDK--SKTNFLNYADNSTNTSDGKFHGQRLNDVILTYVAST
    JSNZ            YGTFVKTGADGTTAKVGTNIPTRGKADNSFRYADNSIDTTDGKFHGQLLNNLKLAYNEKS
                    **:***..:.*.:  ** ** .  .  * :.***** :*:******* **:: *:*  .:

    COL             GKMRAEYAGKTWETSITDLGLSKNQAYNFLITSSQRWGLNQGINANGWMRTDLKGSEFTF
    N315            GKMRAEYAGKTWETSITDLGLSKNQAYNFLITSSQRWGLNQGINANGWMRTDLKGSEFTF
    NCTC8325        GKMRAEYAGKTWETSITDLGLSKNQAYNFLITSSQRWGLNQGINANGWMRTDLKGSEFTF
    Newman          GKMRAEYAGKTWETSITDLGLSKNQAYNFLITSSQRWGLNQGINANGWMRTDLKGSEFTF
    USA300_FPR3757  GKMRAEYAGKTWETSITDLGLSKNQAYNFLITSSQRWGLNQGINANGWMRTDLKGSEFTF
    JSNZ            GIMRAEYAGKIWEANISDLGLDKSEAYNFLITSSQRQGTSQGVYANGWMRTDLNNSTFKL
                    * ******** **:.*:****.*.:*********** * .**: *********:.* *.:

    COL             TPEAPKTITELEKKVEEIPFKKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGV
    N315            TPEAPKTITELEKKLKRFHSRKN-------------------------------------
    NCTC8325        TPEAPKTITELEKKVEEIPFKKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGV
    Newman          TPEAPKTITELEKKVEEIPFKKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGV
    USA300_FPR3757  TPEAPKTITELEKKLKRFHSRKN-------------------------------------
    JSNZ            TPNL---VNKTETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGE
                    **:    :.: *.*  .:  ..:                                     

    COL             IISKGEPKEEITKDPINELTEYGPETIA--------------------------------
    N315            ------------------------------------------------------------
    NCTC8325        IISKGEPKEEITKDPINELTEYGPETIAPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGD
    Newman          IISKGEPKEEITKDPINELTEYGPETIAPGHRDEFDPKLPTGKKEEVPGKPGIKNPETGD
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            KVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGK
                                                                                

    COL             ------------------------------------------------------------
    N315            ------------------------------------------------------------
    NCTC8325        VVRPPVDSVTKYGPVKGDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKGEKTITTPT
    Newman          VVRPPVDSVTKYGPVKGDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKGEKTITTPT
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            VIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPI
                                                                                

    COL             ------------------------------------PGHRDEFDPKLPTGEKEEVPGKPG
    N315            ------------------------------------------------------------
    NCTC8325        LKNPLTGEIISKGESKEEITKDPINELTEYGPETITPGHRDEFDPKLPTGEKEEVPGKPG
    Newman          LKNPLTGEIISKGESKEEITKDPINELTEYGPETITPGHRDEFDPKLPTGEKEEVPGKPG
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            TVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPG
                                                                                

    COL             IKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKG
    N315            ------------------------------------------------------------
    NCTC8325        IKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKG
    Newman          IKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKG
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            IKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPG
                                                                                

    COL             EKTITTPTLKNPLTGVIISKGEP-------------------------------------
    N315            ------------------------------------------------------------
    NCTC8325        EKTITTPTLKNPLTGVIISKGEPKEEITKDPINELTEYGPETITPGHRDEFDPKLPTGEK
    Newman          EKTITTPTLKNPLTGVIISKGEPKEEITKDPINELTEYGPETITPGHRDEFDPKLPTGEK
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            SKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQT
                                                                                

    COL             ------------------------------------------------------------
    N315            ------------------------------------------------------------
    NCTC8325        EEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFKKERKFNPDLAPGTEK
    Newman          EEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFK---------------
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            EKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEER
                                                                                

    COL             ------------------------------------------------------------
    N315            ------------------------------------------------------------
    NCTC8325        VTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELTEYGPETITPGHRDEFD
    Newman          ------------------------------------------------------------
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            VKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIPQGHKDIFD
                                                                                

    COL             ------------------------------------------------------------
    N315            ------------------------------------------------------------
    NCTC8325        PKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPFEKERKFNP
    Newman          -----------------------------------------------------KERKFNP
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            PNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPFETKREFNP
                                                                                

    COL             ---------------------------------------KEEITKDPINELTEYGPETIT
    N315            ------------------------------------------------------------
    NCTC8325        DLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELTEYGPETIT
    Newman          DLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELTEYGPETIT
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            KLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIVEFGGEKIP
                                                                                

    COL             PGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPF
    N315            ------------------------------------------------------------
    NCTC8325        PGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPF
    Newman          PGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPF
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            QGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPETKTVEIPF
                                                                                

    COL             KKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELT
    N315            ------------------------------------------------------------
    NCTC8325        KKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELT
    Newman          KKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPINELT
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            ETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEITKQPVDKIV
                                                                                

    COL             EYGPETITPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSI
    N315            ------------------------------------------------------------
    NCTC8325        EYGPETITPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSI
    Newman          EYGPETITPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSI
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            EFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKHGPKTGTPE
                                                                                

    COL             VEKEEIPFKKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEIT
    N315            ------------------------------------------------------------
    NCTC8325        VEKEEIPFEKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEIT
    Newman          VEKEEIPFEKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISKGESKEEIT
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            TKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGEGQPTEEIT
                                                                                

    COL             KDPINELTEYGPETITPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKY
    N315            ------------------------------------------------------------
    NCTC8325        KDPINELTEYGPETITPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKY
    Newman          KDPINELTEYGPETITPGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKY
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            KQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEEPVDDVIKH
                                                                                

    COL             GPVKGDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISK
    N315            ------------------------------------------------------------
    NCTC8325        GPVKGDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISK
    Newman          GPVKGDSIVEKEEIPFEKERKFNPDLAPGTEKVTREGQKGEKTITTPTLKNPLTGEIISK
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            GPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNPLTGEKVGE
                                                                                

    COL             GESKEEITKDPVNELTEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEE
    N315            ------------------------------------------------------------
    NCTC8325        GESKEEITKDPVNELTEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEE
    Newman          GESKEEITKDPVNELTEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEE
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            GQPTEEITKQPVDKIVEFGGEKIPQGHKDIFDPNLPTDQTEKVPGKPGIKNPDTGKVIEE
                                                                                

    COL             PVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNP
    N315            ---------------------------------------------------------VN-
    NCTC8325        PVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNP
    Newman          PVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNP
    USA300_FPR3757  ---------------------------------------------------------VN-
    JSNZ            PVDDVIKHGPKTGTPETKTVEIPFETKREFNPKLQPGEERVKQEGQPGSKTITTPITVNP
                                                                             ** 

    COL             LTGEKVGEGQPTEEITKQPVDKIVEFGGEKPKDPKGPENPEKPSRPTHPSGPVNPNNPGL
    N315            ------------------------------------------------------------
    NCTC8325        LTGEKVGEGQPTEEITKQPVDKIVEFGGEKPKDPKGPENPEKPSRPTHPSGPVNPNNPGL
    Newman          LTGEKVGEGQPTEEITKQPVDKIVEFGGEKPKDPKGPENPEKPSRPTHPSGPVNPNNPGL
    USA300_FPR3757  ------------------------------------------------------------
    JSNZ            LTGEKVGEGQPTEEITKQPVDKIVEFGGEKPKDPKGPENPEKPSRPTHPSGPVNPDNPGL
                                                                                

    COL             SKDRAKPNGPVHSMDKNDKVKKSKIAKESVANQEKKRAELPKTGLESTQKGLIFSSIIGI
    N315            --------------------------------------------------------LIRI
    NCTC8325        SKDRAKPNGPVHSMDKNDKVKKSKIAKESVANQEKKRAELPKTGLESTQKGLIFSSIIGI
    Newman          SKDRAKPNGPVHSMDKNDKVKKSKIAKESVANQEKKRAELPKTGLESTQKGLIFSSIIGI
    USA300_FPR3757  --------------------------------------------------------LIRI
    JSNZ            SKDRAKPNEPVHSMDKNDKVKKSKIAKKSVANQEKKRAELPKTGAESTQKGLIFSSIIGI
                                                                            :* *

    COL             AGLMLLARRRKN
    N315            ------------
    NCTC8325        AGLMLLARRRKN
    Newman          AGLMLLARRRKN
    USA300_FPR3757  ------------
    JSNZ            AGLMLLARRRKN