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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006132000
- symbol?: gntR
- synonym:
- description?: gluconate operon transcriptional repressor
- gluconate operon transcriptional repressor
- GntR family transcriptional regulator
- gluconate operon transcriptional repressor, putative
- bacterial regulatory s, gntR family protein
- gluconate operon transcriptional repressor (P28 protein)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6207926..6208603
- synteny block?: BlockID0048640
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2443 (gntR)
08BA02176:
C248_2559 (gntR)
11819-97:
MS7_2510
6850:
RSAU_002344 (gntR)
71193:
ST398NM01_2557
ECT-R 2:
ECTR2_2359
ED133:
SAOV_2548c
ED98:
SAAV_2572 (gntR)
HO 5096 0412:
SAEMRSA15_24030 (gntR)
JH1:
SaurJH1_2582
JH9:
SaurJH9_2530
JKD6008:
SAA6008_02542 (gntR)
JKD6159:
SAA6159_02401 (gntR)
LGA251:
SARLGA251_22800 (gntR)
M013:
M013TW_2472
MRSA252:
SAR2584 (gntR)
MSHR1132:
SAMSHR1132_23250
MSSA476:
SAS2392
Mu3:
SAHV_2491 (gntR)
Mu50:
SAV2507 (gntR)
MW2:
MW2425 (gntR)
RF122:
SAB2379c (gntR)
ST398:
SAPIG2557
T0131:
SAT0131_02705
TCH60:
HMPREF0772_10690 (gntR)
TW20:
SATW20_26260 (gntR)
USA300_TCH1516:
USA300HOU_2494 (gntR)
VC40:
SAVC_11400
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMAKQFNVSRSPIRDAFKL
N315 MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMAKQFNVSRSPIRDAFKL
NCTC8325 MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMAKQFNVSRSPIRDAFKL
Newman MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMAKQFNVSRSPIRDAFKL
USA300_FPR3757 MMYGYPEKWLEGMTTGEGIAAELRLGIVNGHIAEGTLLTENQMAKQFNVSRSPIRDAFKL
************************************************************
COL LQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRVKNQERLPIVKEMKKQLEM
N315 LQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRVKNQERLPIVKEMKKQLEM
NCTC8325 LQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRVKNQERLPIVKEMKKQLEM
Newman LQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRVKNQERLPIVKEMKKQLEM
USA300_FPR3757 LQQNQLIQLERMGAHVLPFGEQEKKEMYDLRLMLESFAFSRVKNQERLPIVKEMKKQLEM
************************************************************
COL MKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHLKPVMMALVLTSMRQRMQQNP
N315 MKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHLKPVMMALVLTSMRQRMQQNP
NCTC8325 MKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHLKPVMMALVLTSMRQRMQQNP
Newman MKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHLKPVMMALVLTSMRQRMQQNP
USA300_FPR3757 MKVAVKFEDAESFTKHDFEFHETLIKASNHQYLNSFWSHLKPVMMALVLTSMRQRMQQNP
************************************************************
COL QDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGKDIEGFWLN
N315 QDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGKDIEGFWLN
NCTC8325 QDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGKDIEGFWLN
Newman QDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGKDIEGFWLN
USA300_FPR3757 QDFERIHHNHQVFIDAVEQYDSQILKEAFHLNFDDVGKDIEGFWLN
**********************************************