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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006178000
- symbol?: srtA
- synonym:
- description?: class A sortase SrtA
- class A sortase SrtA
- sortase
- sortase A
- LPXTG specific sortase A
- Sortase A, peptide LPXTG peptidoglycan transferase
- sortase A transpeptidase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6245281..6245901
- synteny block?: BlockID0049030
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2464 (srtA)
08BA02176:
C248_2585 (srtA)
11819-97:
MS7_2534 (srtA)
6850:
RSAU_002369 (srtA)
71193:
ST398NM01_2578
ECT-R 2:
ECTR2_2380
ED133:
SAOV_2571c
ED98:
SAAV_2593 (srtA)
HO 5096 0412:
SAEMRSA15_24270 (srtA)
JH1:
SaurJH1_2603
JH9:
SaurJH9_2551
JKD6008:
SAA6008_02566 (srtA)
JKD6159:
SAA6159_02424 (srtA)
LGA251:
SARLGA251_23030 (srtA)
M013:
M013TW_2500
MRSA252:
SAR2608 (srtA)
MSHR1132:
SAMSHR1132_23470
MSSA476:
SAS2414
Mu3:
SAHV_2512 (srtA)
Mu50:
SAV2528 (srtA)
MW2:
MW2448 (srtA)
RF122:
SAB2402c (srtA)
ST398:
SAPIG2578
T0131:
SAT0131_02731
TCH60:
HMPREF0772_10663 (srtA)
TW20:
SATW20_26490 (srtA)
USA300_TCH1516:
USA300HOU_2517 (srtA)
VC40:
SAVC_11515
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKKWTNRLMTIAGVVLILVAAYLFAKPHIDNYLHDKDKDEKIEQYDKNVKEQASKDKKQQ
N315 MKKWTNRLMTIAGVVLILVAAYLFAKPHIDNYLHDKDKDEKIEQYDKNVKEQASKDNKQQ
NCTC8325 MKKWTNRLMTIAGVVLILVAAYLFAKPHIDNYLHDKDKDEKIEQYDKNVKEQASKDKKQQ
Newman MKKWTNRLMTIAGVVLILVAAYLFAKPHIDNYLHDKDKDEKIEQYDKNVKEQASKDKKQQ
USA300_FPR3757 MKKWTNRLMTIAGVVLILVAAYLFAKPHIDNYLHDKDKDEKIEQYDKNVKEQASKDKKQQ
********************************************************:***
COL AKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGH
N315 AKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGH
NCTC8325 AKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGH
Newman AKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGH
USA300_FPR3757 AKPQIPKDKSKVAGYIEIPDADIKEPVYPGPATPEQLNRGVSFAEENESLDDQNISIAGH
************************************************************
COL TFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRDVKPTDVGVLDEQKGKDKQLT
N315 TFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRDVKPTDVEVLDEQKGKDKQLT
NCTC8325 TFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRDVKPTDVGVLDEQKGKDKQLT
Newman TFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRDVKPTDVGVLDEQKGKDKQLT
USA300_FPR3757 TFIDRPNYQFTNLKAAKKGSMVYFKVGNETRKYKMTSIRDVKPTDVGVLDEQKGKDKQLT
********************************************** *************
COL LITCDDYNEKTGVWEKRKIFVATEVK
N315 LITCDDYNEKTGVWEKRKIFVATEVK
NCTC8325 LITCDDYNEKTGVWEKRKIFVATEVK
Newman LITCDDYNEKTGVWEKRKIFVATEVK
USA300_FPR3757 LITCDDYNEKTGVWEKRKIFVATEVK
**************************