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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006183000
- symbol?: sdaAA
- synonym:
- description?: L-serine dehydratase, iron-sulfur-dependent subunit alpha
- L-serine dehydratase, iron-sulfur-dependent subunit alpha
- L-serine dehydratase, iron-sulfur-dependent, alpha subunit
- L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha
- 2-hydroxymethylglutarate dehydratase
- L-serine ammonia-lyase alpha subunit
- L-serine dehydratase
- L-serine dehydratase, alpha subunit
- L-serine dehydratase alpha subunit
- L-serine dehydratase subunit alpha
- putative L-serine dehydratase, alpha chain
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6247537..6248436
- synteny block?: BlockID0049080
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2466
08BA02176:
C248_2588
11819-97:
MS7_2536 (sdaAA)
6850:
RSAU_002372 (sdaAA)
71193:
ST398NM01_2581
ECT-R 2:
ECTR2_2382 (sdaAA)
ED133:
SAOV_2574c
ED98:
SAAV_2596 (sdaAA)
HO 5096 0412:
SAEMRSA15_24290
JH1:
SaurJH1_2606
JH9:
SaurJH9_2554
JKD6008:
SAA6008_02568 (sdaAA)
JKD6159:
SAA6159_02426 (sdaAA)
LGA251:
SARLGA251_23050
M013:
M013TW_2502
MRSA252:
SAR2610
MSHR1132:
SAMSHR1132_23500
MSSA476:
SAS2416
Mu3:
SAHV_2514
Mu50:
SAV2530
MW2:
MW2451
RF122:
SAB2404c
ST398:
SAPIG2581 (sdaAA)
T0131:
SAT0131_02735 (porA)
TCH60:
HMPREF0772_10661 (sdaAA)
TW20:
SATW20_26510
USA300_TCH1516:
USA300HOU_2521 (sdhA2)
VC40:
SAVC_11525
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQNLDVMRDAVIKGTTGD
N315 MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQNLDVMRDAVIKGTTGD
NCTC8325 MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQNLDVMRDAVIKGTTGD
Newman MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQNLDVMRDAVIKGTTGD
USA300_FPR3757 MFDSIRETIDYAVENNMSFADIMVKEEMELSGKSRDEVRAQMKQNLDVMRDAVIKGTTGD
************************************************************
COL GVESVTGYTGHDAAKLRDYNETHHALSGYEMIDAVKGAIATNEVNAAMGIICATPTAGSS
N315 GVESVTGYTGHDAAKLRDYNETHHALSGYEMIDAVKGAIATNEVNAAMGIICATPTAGSS
NCTC8325 GVESVTGYTGHDAAKLRDYNETHHALSGYEMIDAVKGAIATNEVNAAMGIICATPTAGSS
Newman GVESVTGYTGHDAAKLRDYNETHHALSGYEMIDAVKGAIATNEVNAAMGIICATPTAGSS
USA300_FPR3757 GVESVTGYTGHDAAKLRDYNETHHALSGYEMIDAVKGAIATNEVNAAMGIICATPTAGSS
************************************************************
COL GTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNASVAGATGGCQAEVGSASAMAA
N315 GTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNASVAGATGGCQAEVGSASAMAA
NCTC8325 GTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNASVAGATGGCQAEVGSASAMAA
Newman GTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNASVAGATGGCQAEVGSASAMAA
USA300_FPR3757 GTIPGALFKLEKTHDLTEEQMIDFLFTSALFGRVVANNASVAGATGGCQAEVGSASAMAA
************************************************************
COL AAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLAL
N315 AAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLAL
NCTC8325 AAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLAL
Newman AAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLAL
USA300_FPR3757 AAAVAIFGGSPEASGHAMALAISNLLGLVCDPVAGLVEIPCVMRNAIGSGNALISADLAL
************************************************************
COL AGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLAGTPTGEAIKRKIFGTAEDMVKNN
N315 AGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLAGTPTGEAIKRKIFGTAEDMVKNN
NCTC8325 AGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLAGTPTGEAIKRKIFGTAEDMVKNN
Newman AGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLAGTPTGEAIKRKIFGTAEDMVKNN
USA300_FPR3757 AGIESRIPVDEVIEAMDKVGRNLPASLRETGLGGLAGTPTGEAIKRKIFGTAEDMVKNN
***********************************************************