PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN006257000
• symbol^?: —
• synonym:
• description^?: alpha/beta hydrolase

  descriptions from strain specific annotations:

  • alpha/beta hydrolase
  • alpha/beta fold family hydrolase
  • hydrolase
  • hydrolase, alpha/beta hydrolase fold family
  • hydrolase family protein
  • alpha/beta hydrolase fold family protein
  • hydrolase/acyltransferase
  • pseudogene
  • putative hydrolase/acyltransferase
• strand^?: +
• coordinates^?: 6311848..6312679
• synteny block^?: BlockID0049800
• occurrence^?: in 70% of 33 strains

⊟Orthologs

COL:
SACOL2597
N315:
SA2367
NCTC8325:
SAOUHSC_02900
Newman:
NWMN_2480
USA300_FPR3757:
SAUSA300_2518
04-02981:
SA2981_2519
08BA02176:
—
11819-97:
MS7_2587
6850:
RSAU_002422
71193:
—
ECT-R 2:
ECTR2_2435
ED133:
SAOV_2626
ED98:
SAAV_2647
HO 5096 0412:
—
JH1:
SaurJH1_2657
JH9:
SaurJH9_2603
JKD6008:
—
JKD6159:
—
LGA251:
SARLGA251_23550
M013:
M013TW_2555
MRSA252:
—
MSHR1132:
—
MSSA476:
SAS2467
Mu3:
SAHV_2565
Mu50:
SAV2581
MW2:
MW2501
RF122:
SAB2455
ST398:
—
T0131:
—
TCH60:
—
TW20:
SATW20_27010
USA300_TCH1516:
USA300HOU_2575
VC40:
SAVC_11780

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             METLELQGAKLRYHQVGQGPVLIFIPGANGTGDIFLPLAEQLKDHFTVVAVDRRDYGESE
  N315            METLELQGAKLRYHQVGQGPVLIFIPGANGTGNIFLPLAEQLKDHFTVVAVDRRDYGESE
  NCTC8325        METLELQGAKLRYHQVGQGPVLIFIPGANGTGDIFLPLAEQLKDHFTVVAVDRRDYGESE
  Newman          METLELQGAKLRYHQVGQGPVLIFIPGANGTGDIFLPLAEQLKDHFTVVAVDRRDYGESE
  USA300_FPR3757  METLELQGAKLRYHQVGQGPVLIFIPGANGTGDIFLPLAEQLKDHFTVVAVDRRDYGESE
                  ********************************:***************************
  
  COL             LTEPLPDSASNPDSDYRVKRDAQDIAELAKSLSDEPVYILGSSSGSIVAMHVLKDYPEVV
  N315            LTEPLPDSASNPDSDYRVKRDAQDIAELAKSLSDEPVYILGSSSGSIVAMHVLKDYPEVV
  NCTC8325        LTEPLPDSASNPDSDYRVKRDAQDIAELAKSLSDEPVYILGSSSGSIVAMHVLKDYPEVV
  Newman          LTEPLPDSASNPDSDYRVKRDAQDIAELAKSLSDEPVYILGSSSGSIVAMHVLKDYPEVV
  USA300_FPR3757  LTEPLPDSASNPDSDYRVKRDAQDIAELAKSLSDEPVYILGSSSGSIVAMHVLKDYPEVV
                  ************************************************************
  
  COL             KKIAFHEPPINTFLPDSTYWKDKNDDIVHQILTEGLEKGMKTFGETLNIAPIDAKMMSQP
  N315            KKIAFHEPPINTFLPDSTYWKDKNDDIVHQILTEGLEKGMKTFGETLNIAPIDAKMMSQP
  NCTC8325        KKIAFHEPPINTFLPDSTYWKDKNDDIVHQILTEGLEKGMKTFGETLNIAPIDAKMMSQP
  Newman          KKIAFHEPPINTFLPDSTYWKDKNDDIVHQILTEGLEKGMKTFGETLNIAPIDAKMMSQP
  USA300_FPR3757  KKIAFHEPPINTFLPDSTYWKDKNDDIVHQILTEGLEKGMKTFGETLNIAPIDAKMMSQP
                  ************************************************************
  
  COL             ADTEEGRIEQYKRTMFWSEFEIRQYTHSDITLDDFTKYSDKITLLNGTDSRGSFPQDVNF
  N315            ADTEEGRIEQYKRTMFWSEFEIRQYTHSDITLDDFTKYSDKITLLNGTDSRGSFPQDVNF
  NCTC8325        ADTEEGRIEQYKRTMFWSEFEIRQYTHSDITLDDFTKYSDKITLLNGTDSRGSFPQDVNF
  Newman          ADTEEGRIEQYKRTMFWSEFEIRQYTHSDITLDDFTKYSDKITLLNGTDSRGSFPQDVNF
  USA300_FPR3757  ADTEEGRIEQYKRTMFWLEFEIRQYTHSNITLDDFTKYSDKITLLNGTDSRGSFPQDVNF
                  ***************** **********:*******************************
  
  COL             YINKETGIPIVDIPGGHLGYIQKPEGFADVLLNMWG
  N315            YINKETGIPIVDIPGGHLGYIQKPEGFADVLLNMWG
  NCTC8325        YINKETGIPIVDIPGGHLGYIQKPEGFADVLLNMWG
  Newman          YINKETGIPIVDIPGGHLGYIQKPEGFADVLLNMWG
  USA300_FPR3757  YINKETGIPIVDIPGGHLGYIQKPEGFADVLLNMWG
                  ************************************