PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus N315
• locus tag: SA_RS10600 [old locus tag: SA1846 ]
• pan locus tag^?: SAUPAN005284000
• symbol: SA_RS10600
• pan gene symbol^?: scrB
• synonym:
• product: sucrose-6-phosphate hydrolase

⊟Genome View

⊟Gene

⊟General

• type: CDS
• locus tag: SA_RS10600 [old locus tag: SA1846 ]
• symbol: SA_RS10600
• product: sucrose-6-phosphate hydrolase
• replicon: chromosome
• strand: -
• coordinates: 2083528..2085012
• length: 1485
• essential: no DEG other strains

⊟Accession numbers

• Location: NC_002745 (2083528..2085012) NCBI
• BioCyc: SA_RS10600 BioCyc
• MicrobesOnline: see SA1846

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

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  ATGACCGAATGGACTAGAGAAGAACGTTATCAACGAATCGAGGACGTTGATACTGAGTAT
  TTTAAAACATTAAAACAACAAGTTGATCAATCAAAATTTCGTCAACAATTTCATATACAA
  CCAGAAACAGGTTTATTAAATGATCCCAACGGACTTATTTTTTATAAAGGGAAGTATTAT
  GTTTCACATCAATGGTTCCCATTAGGCGCAGTACATGGCTTAAAGTATTGGTATAACTAC
  ACGAGTGATGACTTAATAAACTTTAAACCTGAAGGGCCAATATTAAATCCAGATACTAAA
  TATGACAGCCATGGTGTTTATAGCGGTAGCGCTTTTGAATATAACGGGCATTTATATTAT
  ATGTACACAGGAAATCATCGAGATAATCATTGGCAACGACATGCGAGTCAGATGATCGCA
  CGATTGAAAGAAGACGGTTCAGTTGAAAAGTTTCCAAAGCCAGTAATTAGCCAGCAACCA
  GAAGGATATACAAGTCATTTTAGAGATCCTAAAGTTTTTAAATATGGTGAGAAATATTAT
  GCAATCATTGGCGCACAAAATAATGATCAGCAAGGTCGATTATTACTTTATAATACTGAA
  GATATAATTAATTGGCATTATTTAGGTGAAATAAATACAGAGTTAGATGATTTTGGATAT
  ATGTGGGAATGCCCAGATTACTTTAATTTAGATAATCAAGATGTCATACTTATTTGTCCA
  CAAGGTATTGAACCAAAAGGCAATCAGTTCAAAAATATTTATCAAAGTGGTTATATACTT
  GGAAAGTTTGATATTGAAAAGTTAACATATGAACATGAAAATTTTGTCGAGCTTGATAAT
  GGCTTTGATTTCTATGCACCTCAAACATTTTTAGATGAAAAAGGCCGACGAGTACTAATT
  GGATGGATGGGGTTACCGGAAATCGAATATCCTACTGATAATGAAGGATGGGCCCATTGC
  TTAACAATTCCTCGTGTATTAAATGTAGAAAATGGTCAACTTAAGCAACGTCCATATCCA
  GCGTTGGAAAAATTACGTCACAATAAAGAGACAGCATTAGGCTACGCAAATAAATTTACT
  CGAAAATTACATCCGTATGAAGGTAAACAGTATGAATTAATCATAGATATTTTGGATAAT
  GATGCTACCGAAGTGTACTTTGAATTACGTACATCTAAGACTTCTTCAACATTAATTGCT
  TATAACAAGCGTGAAAATAAAATAACATTAGATCGCAGCGACAGTGGTTTATTGCCGACA
  AATGTTGAAGGTACGACGCGTAGTACGATATTAGACACGCCATTAAAGCAATTACAAATT
  TTTGTTGATACATCTAGTATAGAAATTTTCTGTAATGATGGGGAACGTGTTTTGACATCT
  CGAATTTTCCCGACAGAAGACGCACTAGGTATTAAAACATCAACAGAATCAGGGCAAGTA
  TATTTACAATTTACTAAATATGATTTAAAGGATGAACATAAATGA
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⊟Protein

⊟General

• locus tag: SA_RS10600 [old locus tag: SA1846 ]
• symbol: SA_RS10600
• description: sucrose-6-phosphate hydrolase
• length: 494
• theoretical pI: 5.18236
• theoretical MW: 57908.3
• GRAVY: -0.744534

⊟Function

• reaction:
  EC 3.2.1.26?  ExPASy
  Beta-fructofuranosidase Hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides
• TIGRFAM:
  Metabolism Energy metabolism Biosynthesis and degradation of polysaccharides sucrose-6-phosphate hydrolase (TIGR01322; EC 3.2.1.-; HMM-score: 611)
• TheSEED: see SA1846
• PFAM:
  B_Fructosidase (CL0143) Glyco_hydro_32N; Glycosyl hydrolases family 32 N-terminal domain (PF00251; HMM-score: 328.9)
  and 2 more
  Concanavalin (CL0004) Glyco_hydro_32C; Glycosyl hydrolases family 32 C terminal (PF08244; HMM-score: 82.5)
  B_Fructosidase (CL0143) Glyco_hydro_130; beta-1,4-mannooligosaccharide phosphorylase (PF04041; HMM-score: 15.7)

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: Cytoplasmic
  • Cytoplasmic Score: 9.97
  • Cytoplasmic Membrane Score: 0
  • Cellwall Score: 0.01
  • Extracellular Score: 0.02
  • Internal Helices: 0
• LocateP:
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.007677
  • TAT(Tat/SPI): 0.001512
  • LIPO(Sec/SPII): 0.00133
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 446063577 NCBI
• RefSeq: WP_000141432 NCBI
• UniProt: see SA1846

⊟Protein sequence

• MTEWTREERYQRIEDVDTEYFKTLKQQVDQSKFRQQFHIQPETGLLNDPNGLIFYKGKYYVSHQWFPLGAVHGLKYWYNYTSDDLINFKPEGPILNPDTKYDSHGVYSGSAFEYNGHLYYMYTGNHRDNHWQRHASQMIARLKEDGSVEKFPKPVISQQPEGYTSHFRDPKVFKYGEKYYAIIGAQNNDQQGRLLLYNTEDIINWHYLGEINTELDDFGYMWECPDYFNLDNQDVILICPQGIEPKGNQFKNIYQSGYILGKFDIEKLTYEHENFVELDNGFDFYAPQTFLDEKGRRVLIGWMGLPEIEYPTDNEGWAHCLTIPRVLNVENGQLKQRPYPALEKLRHNKETALGYANKFTRKLHPYEGKQYELIIDILDNDATEVYFELRTSKTSSTLIAYNKRENKITLDRSDSGLLPTNVEGTTRSTILDTPLKQLQIFVDTSSIEIFCNDGERVLTSRIFPTEDALGIKTSTESGQVYLQFTKYDLKDEHK

⊟Experimental data

• experimentally validated: data available for COL, NCTC8325
• protein localization: data available for COL
• quantitative data / protein copy number per cell: data available for COL
• interaction partners:

⊟Expression & Regulation

⊟Operon

⊟Regulation

• regulator: ScrR see SA1846

⊟Transcription pattern

• S.aureus Expression Data Browser: data available for NCTC8325

⊟Protein synthesis (provided by Aureolib)

• Aureolib: data available for COL

⊟Protein stability

• half-life: no data available

⊟Biological Material

⊟Mutants

⊟Expression vector

⊟lacZ fusion

⊟GFP fusion

⊟two-hybrid system

⊟FLAG-tag construct

⊟Antibody

⊟Other Information

You are kindly invited to share additional interesting facts.

⊟Literature

⊟References

⊟Relevant publications