PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN004095000
• symbol^?: —
• synonym:
• description^?: cell division protein FtsK

  descriptions from strain specific annotations:

  • cell division protein FtsK
  • FtsK/SpoIIIE family protein
  • FtsK/SpoIIIE family cell division protein
• strand^?: -
• coordinates^?: 4372902..4374588
• synteny block^?: BlockID0031250
• occurrence^?: in 27% of 33 strains

⊟Orthologs

COL:
SACOL1578
N315:
—
NCTC8325:
—
Newman:
—
USA300_FPR3757:
SAUSA300_1482
04-02981:
—
08BA02176:
—
11819-97:
—
6850:
—
71193:
—
ECT-R 2:
—
ED133:
—
ED98:
—
HO 5096 0412:
SAEMRSA15_12350
JH1:
—
JH9:
—
JKD6008:
SAA6008_02635
JKD6159:
—
LGA251:
—
M013:
—
MRSA252:
SAR1292
MSHR1132:
SAMSHR1132_15350
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
—
T0131:
SAT0131_02810 (thrB)
TCH60:
—
TW20:
SATW20_27170
USA300_TCH1516:
USA300HOU_0630
VC40:
—

⊟Genome Viewer

COL
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MAMNEIALFKGVRIQPYQKYIDFMFASVLAFIFLVYRIYILFIDYKSVNKKLDILTLFAY
  USA300_FPR3757  MAMNEIALFKGVRIQPYQKYIDFMFASVLAFIFLVYRIYILFIDYKSVNKKLDILTLFAY
                  ************************************************************
  
  COL             FKPHLLYLLIGTAIIFVICKLIAQLLIRFKTKDLAEMIETQGFHNRTVIKKTTEYIPIDY
  USA300_FPR3757  FKPHLLYLLIGTAIIFVICKLIAQFLIRFKTKDLAEMIETQGFHNRTVIKKTTEYIPIDY
                  ************************:***********************************
  
  COL             KQTEYDYYPTMFYKRGKKTFVIHIKKDGSRFQDNYLELETIIEPMFNSELVEKKHIGRYL
  USA300_FPR3757  KQTEYDYYPTMFYKRGKKSFVIHIKKDGSRFQDNYLELETIIEPMFNSELVEKKHIGRYL
                  ******************:*****************************************
  
  COL             RYEFMPLKYKKRIVMNGEQESNTIFYDTKIAITHQITWDFVKAPHGLVTGITGGGKTYFL
  USA300_FPR3757  RYEFMPLKYKKRIVMNGEQESNTIFYDTKIAITHQITWDFVKAPHGLVTGITGGGKTYFL
                  ************************************************************
  
  COL             FYVIRELFRRHSEVRLLDPKVSDLSFMKRVIGDDKVADTKGQILKQLREANNEMEERFRL
  USA300_FPR3757  FYVIRELFRRHSEVRLLDPKVSDLSFMKRVIGDDKVADTKGQILKQLREANNEMEERFRL
                  ************************************************************
  
  COL             MNDSSDYKIGNDFRNFDMRPYFIIFDEVTAFTSTLDKKELQEMNDYLINIIMKGRQAGVF
  USA300_FPR3757  MNDSSDYKIGNDFRNFDMRPYFIIFDEVTAFTSTLDKKELQEMNDYLINIIMKGRQAGVF
                  ************************************************************
  
  COL             MFLTAQRPDADVIKGNVRDQLGLRVSLGNLSNDGYRMTFGQTDKEFQTIHDSDIGRGYIT
  USA300_FPR3757  MFLTAQRPDADVIKGNVRDQLGLRVSLGNLSNDGYRMTFGQTDKEFQTIHDSDIGRGYIS
                  ***********************************************************:
  
  COL             ILGQYNEPILFDAPLMEQYDFVEDVKQILNKE
  USA300_FPR3757  ILGQYNEPILFDAPLMEQYDFVEDVKQILNKE
                  ********************************