Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN005722000
- symbol?: —
- synonym:
- description?: MarR family transcriptional regulator
- MarR family transcriptional regulator
- MarR family regulatory protein
- transcriptional regulator, putative
- winged helix DNA-binding protein
- HTH-type transcriptional regulator
- marR family protein
- transcriptional regulator, MarR family
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 5827475..5827915
- synteny block?: BlockID0044680
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2203
08BA02176:
C248_2302
11819-97:
MS7_2284
6850:
RSAU_002099
71193:
ST398NM01_2316
ECT-R 2:
ECTR2_2126
ED133:
SAOV_2303
ED98:
SAAV_2328
HO 5096 0412:
SAEMRSA15_21630
JH1:
SaurJH1_2332
JH9:
SaurJH9_2290
JKD6008:
SAA6008_02302
JKD6159:
SAA6159_02170
LGA251:
SARLGA251_20490
M013:
M013TW_2223
MRSA252:
SAR2349
MSHR1132:
SAMSHR1132_20900
MSSA476:
SAS2155
Mu3:
SAHV_2249
Mu50:
SAV2265
MW2:
MW2183
RF122:
SAB2137
ST398:
SAPIG2316
T0131:
SAT0131_02440
TCH60:
HMPREF0772_10935
TW20:
SATW20_23970
USA300_TCH1516:
USA300HOU_2246 (marR)
VC40:
SAVC_10185
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEK
N315 MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEK
NCTC8325 MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEK
Newman MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEK
USA300_FPR3757 MLSQEFFNSFITIYRPYLKLAEPILEKHNIYYGQWLILRDIAKHQPTTLIEISHRRAIEK
************************************************************
COL PTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNI
N315 PTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNI
NCTC8325 PTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNI
Newman PTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNI
USA300_FPR3757 PTARKTLKALIENDLITVENSLEDKRQKFLTLTPKGHELYEIVCLDVQKLQQAVVAKTNI
************************************************************
COL SQDQMQETINVMNQIHEILLKEAHND
N315 SQDQMQETINVMNQIHEILLKEAHND
NCTC8325 SQDQMQETINVMNQIHEILLKEAHND
Newman SQDQMQETINVMNQIHEILLKEAHND
USA300_FPR3757 SQDQMQETINVMNQIHEILLREAHND
********************:*****