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NCBI: 02-MAR-2017

Summary[edit source | edit]

  • organism: Staphylococcus aureus Newman
  • locus tag: NWMN_RS05545 [old locus tag: NWMN_0989 ]
  • pan locus tag?: SAUPAN003353000
  • symbol: NWMN_RS05545
  • pan gene symbol?:
  • synonym:
  • product: hypothetical protein

Genome View[edit source | edit]

Gene[edit source | edit]

General[edit source | edit]

  • type: CDS
  • locus tag: NWMN_RS05545 [old locus tag: NWMN_0989 ]
  • symbol: NWMN_RS05545
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1096705..1097844
  • length: 1140
  • essential: unknown

Accession numbers[edit source | edit]

  • Location: NC_009641 (1096705..1097844) NCBI
  • MicrobesOnline:

Phenotype[edit source | edit]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit source | edit]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    ATGAAAAGCGTTGGCTTAATCACAGAATATAATCCCTTTCATAATGGGCATCAATATCAT
    ATTAATCAATCTAAAAAACTTACAAATGCTGACGTTACTATTGCAATAATGAGTGGTAAC
    TTTGTCATGCGTGGCGAACCAGCAATCTATAATAAGTTTACTCGTGCAAAAATGGCATTA
    TCAACAGCTGATTTAGTTATCGAACTACCAGCAACTGCCAGTTTATCATCTGGCGATCAT
    TTTGCCGAACTAGCAGTTAAAGTCGCAGATTATATGAGTGTCGATACAATTGCATTTGGT
    AGTGAAAATAATGATATCAAAACATTAAAGCAATTAGCACACAGCATTAATGAAATTGAA
    CAATCTGAATCCTTTTCACAAAAAGTAAAAGAAGGTAAAAGCTACCCTCGTATCATTAGC
    GAATTATTAGAGCATCATGAAGCACTAGCAAGTCCTAACAACATACTTGGTATTAGTTAC
    CTGAAAGCAATTGCTAAAAATGCTAAAAACATCAATGCAATTTCTATCAAACGAGAAAAT
    GCTCAACATCATGATTCATTAATTCAACACCATCAGTTTGCAAGTGGTACATCTATTAGA
    ACATCAATCATTAGTCAAGATGATCATTGGCATCATGTGGTACCTAAAGATATTCAACAC
    TTGTACGTAACACCTCATATAACATTAAATCAAATATTTCCATATTTGAAATATCAAATC
    ATAGCTATGACTACAGATTCATTAAAAAATATTTATACTGTTACTGAAGGTTTTGAAAAT
    CGTTTGAAATCTAACATTTATGAAGCAACTGATTTTCATCATTTTGTAAAATTACTAAAA
    ACAAAGCGTTATACATATACGCATATCCAAAGACTGTTAATGAATGTATTATTAAACATT
    AAACCTACAGATGTTACGAGTAACATTCACGCAGTTAAAGTATTAGCGATGAACGACCGT
    GGCAGACAATATTTAAAGCATTTAAAAACAGCGTTCCCAGAAAGACAATATATAACCAAT
    ATTAACAAAAGCAATGCACATTACTTCACAAATGAAATCAAAGCAACACACATATACAAT
    GCAATAAGCGGGCAACAACAAACAGATTTCAACACGCCTGTCATACAGCAATATCGTTAA
    60
    120
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    360
    420
    480
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    720
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    840
    900
    960
    1020
    1080
    1140

Protein[edit source | edit]

General[edit source | edit]

  • locus tag: NWMN_RS05545 [old locus tag: NWMN_0989 ]
  • symbol: NWMN_RS05545
  • description: hypothetical protein
  • length: 379
  • theoretical pI: 9.60936
  • theoretical MW: 43239.9
  • GRAVY: -0.393404

Function[edit source | edit]

  • reaction:
  • TIGRFAM:
    cytidyltransferase-like domain (TIGR00125; HMM-score: 26)
    MetabolismBiosynthesis of cofactors, prosthetic groups, and carriersPyridine nucleotidesnicotinamide-nucleotide adenylyltransferase (TIGR01527; EC 2.7.7.1; HMM-score: 17.7)
  • TheSEED:
  • PFAM:
    HUP (CL0039) HIGH_NTase1; HIGH Nucleotidyl Transferase (PF05636; HMM-score: 403)
    CTP_transf_like; Cytidylyltransferase-like (PF01467; HMM-score: 22.5)
    no clan definedLsmAD; LsmAD domain (PF06741; HMM-score: 15.8)

Structure, modifications & interactions[edit source | edit]

  • domains:
  • modifications:
  • cofactors:
  • effectors:
  • protein partners:

Localization[edit source | edit]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • Ymax: 0.13
    • Ymax_pos: 21
    • Cmax: 0.126
    • Cmax_pos: 21
    • Smax: 0.197
    • Smax_pos: 14
    • Smean: 0.115
    • D: 0.124
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit source | edit]

  • GI: 446766355 NCBI
  • RefSeq: WP_000843611 NCBI
  • UniProt:

Protein sequence[edit source | edit]

  • MKSVGLITEYNPFHNGHQYHINQSKKLTNADVTIAIMSGNFVMRGEPAIYNKFTRAKMALSTADLVIELPATASLSSGDHFAELAVKVADYMSVDTIAFGSENNDIKTLKQLAHSINEIEQSESFSQKVKEGKSYPRIISELLEHHEALASPNNILGISYLKAIAKNAKNINAISIKRENAQHHDSLIQHHQFASGTSIRTSIISQDDHWHHVVPKDIQHLYVTPHITLNQIFPYLKYQIIAMTTDSLKNIYTVTEGFENRLKSNIYEATDFHHFVKLLKTKRYTYTHIQRLLMNVLLNIKPTDVTSNIHAVKVLAMNDRGRQYLKHLKTAFPERQYITNINKSNAHYFTNEIKATHIYNAISGQQQTDFNTPVIQQYR

Experimental data[edit source | edit]

  • experimentally validated: no data available

Expression & Regulation[edit source | edit]

Operon[edit source | edit]

  • NWMN_RS05545 no polycistronic organisation predicted

Regulation[edit source | edit]

  • sigma factor:
  • regulator:

Transcription pattern[edit source | edit]

Protein synthesis (provided by Aureolib)[edit source | edit]

Protein stability[edit source | edit]

  • half-life: no data available

Biological Material[edit source | edit]

Mutants[edit source | edit]

Expression vector[edit source | edit]

lacZ fusion[edit source | edit]

GFP fusion[edit source | edit]

two-hybrid system[edit source | edit]

FLAG-tag construct[edit source | edit]

Antibody[edit source | edit]

Other Information[edit source | edit]

You are kindly invited to share additional interesting facts.

Literature[edit source | edit]

References[edit source | edit]

Relevant publications[edit source | edit]